In recent years, due to various anthropogenic activities, such as agriculture and livestock, the presence of nitrogen-associated contaminants has been increasing in surface- and groundwater resources. Among these, the main compounds present in groundwater are ammonia, nitrite, and nitrate. However, it is sometimes difficult to assess such effects given the scarcity or lack of information and the complexity of the system. In the current study, a methodology is proposed to assess nitrate in groundwater from diffuse sources considering spatiotemporal patterns of hydrological systems using a coupled SWAT/MODFLOW/MT3DMS model. The application of the model is carried out using a simplified simulation scheme of hydrological and agricultural systems because of the limited spatial and temporal data. The study area includes the Cuitzeo Lake basin in superficial flow form and the Morelia–Querendaro aquifer in groundwater flow form. The results within the methodology are surface runoff, groundwater levels, and nitrate concentrations present in surface- and groundwater systems. The results indicate that the historical and simulated nitrate concentrations were obtained within acceptable values of the statistical parameters and, therefore, are considered adequate.

In recent years, human activities have impacted surface water and groundwater and their interactions with natural water bodies. Lake Cuitzeo is one of Mexico’s most important water bodies but has significantly reduced its flooded area in recent years. Previous studies did not explicitly evaluate the combined effects of hydrological variables on lake dynamics, limiting the understanding of how basin-scale processes influence lake-level. The objective of this study is to evaluate the change in spatio-temporal patterns of hydrological variables under climatic and anthropogenic stress in the Lake Cuitzeo endorheic basin. The proposed methodology uses the SWAT model to analyze at the basin scale, land use and land cover changes, and trends in precipitation and their effect on hydrological processes. Consequently, groundwater flow interactions were assessed for the first time for the Cuitzeo Lake Basin using an automatically coupled SWAT-MODFLOW (v3, 2019), despite limited observational data. A statistically significant change in mean precipitation was detected beginning in 2015, with a decrease of 10.22% compared to the 1973–2014 mean. Land use and land cover changes between 1997 and 2013 resulted in a 26.20% increase in surface runoff. In contrast, estimated evapotranspiration decreased by 1.77%, potentially associated with the reduction in forest cover. As a combined effect of decreased precipitation and land use and land cover change, groundwater percolation declined by 6.34%. Overall, the combined effects of climatic variables and anthropogenic activities have altered lake–aquifer interaction.

Water availability in sufficient quantity and quality is increasingly challenging in countries with limited water resources, such as Mexico. The present work takes as a case study the Río Grande in the Morelia Basin (Michoacán), widely studied in the functioning of its surface hydrology and with less detail in the groundwater. A review of potential sites for the implementation of induced recharge zones is presented, considering different methods, including the use of excess rainfall peaks, their conduction and temporary storage in infiltration ponds, the estimation of induced recharge volumes that micro-basins, irrigation returns and treated wastewater can capture. All induced recharge options are evaluated in a pre-existing conjunctive water management tool, and the improvement in water availability conditions in the water system of the study basin is discussed. A base scenario and induced recharge proposals are evaluated by quantifying the costs associated with their implementation.