Alejandra M. Fernandez

Dr. Alejandra M. Fernandez

orcid

Research Focus & Metrics

Academic Career Length

8Years (2019-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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7 April 2019 in Journal of Neuroscience Research
Verified
Journal Article
Closed access
PDF file
KBKen Berglund
Ken Berglund
AFAlejandra M. Fernandez
Alejandra M. Fernandez
CGClaire‐Anne N. Gutekunst
Claire‐Anne N. Gutekunst
UHUte Hochgeschwender
Ute Hochgeschwender
RGRobert E. Gross
Robert E. Gross

29 June 2022 in Epilepsia
Verified
Journal Article
Closed access
ECEric R. Cole
Eric R. Cole
DGDayton P. Grogan
Dayton P. Grogan
NLNealen G. Laxpati
Nealen G. Laxpati
AFAlejandra M. Fernandez
Alejandra M. Fernandez
HSHenry M. Skelton
Henry M. Skelton
RGRobert E. Gross
Robert E. Gross

10 July 2020 in Journal of Neural Engineering
Verified
Journal Article
Closed access
SPSang-Eon Park
Sang-Eon Park
MCMark J Connolly
Mark J Connolly
IEIoannis Exarchos
Ioannis Exarchos
AFAlejandra M. Fernandez
Alejandra M. Fernandez
MGMihir Ghetiya
Mihir Ghetiya
RGRobert E Gross
Robert E Gross
Objective. Developing a new neuromodulation method for epilepsy treatment requires a large amount of time and resources to find effective stimulation parameters and often fails due to inter-subject variability in stimulation effect. As an alternative, we present a novel data-driven surrogate approach which can optimize the neuromodulation efficiently by investigating the stimulation effect on surrogate neural states. Approach. Medial septum (MS) optogenetic stimulation was applied for modulating electrophysiological activities of the hippocampus in a rat temporal lobe epilepsy model. For the new approach, we implemented machine learning techniques to describe the pathological neural states and to optimize the stimulation parameters. Specifically, first, we found neural state surrogates to estimate a seizure susceptibility based on hippocampal local field potentials. Second, we modulated the neural state surrogates in a desired way with the subject-specific optimal stimulation parameters found by in vivo Bayesian optimization. Finally, we tested whether modulating the neural state surrogates affected seizure frequency. Main results. We found two neural state surrogates: The first was hippocampal theta power by considering its well-known relationship with epilepsy, and the second was the output of pre-ictal state model (PriSM) which was built by characterizing the hippocampal activity during the pre-ictal period. The optimal stimulation parameters found by Bayesian optimization outperformed the other parameters in terms of modulating the surrogates toward anti-seizure neural state. When treatment efficacy was tested, the subject-specific optimal parameters for increasing theta power were more effective to suppress seizures than fixed stimulation parameter (7 Hz). However, modulation of the other neural state surrogate, PriSM, did not suppress seizures. Significance. The surrogate approach can save enormous time and resources to find subject-specific optimal stimulation parameters which can effectively modulate neural states and further improve therapeutic effectiveness. This approach can also be used for improving neuromodulation treatment of other neurological or psychiatric diseases.

1 February 2021 in Journal of Neural Engineering
Verified
Journal Article
Closed access
PDF file
MCMark Jude Connolly
Mark Jude Connolly
SPSang-Eon Park
Sang-Eon Park
NLNealen G Laxpati
Nealen G Laxpati
SZSyed Ali Zaidi
Syed Ali Zaidi
MGMihir Ghetiya
Mihir Ghetiya
RGRobert E Gross
Robert E Gross
Objective. Neural modulation is a fundamental tool for understanding and treating neurological and psychiatric diseases. However, due to the high-dimensional space, subject-specific responses, and variability within each subject, it is a major challenge to select the stimulation parameters that have the desired effect. Data-driven optimization provides a range of different algorithms and tools for addressing this challenge, but each of these algorithms has specific strengths and limitations, and therefore must be carefully designed for a given neural modulation problem. Here we present a framework for designing data-driven optimization algorithms for neural modulation. Approach. We develop this framework using an optogenetic medial septum stimulation model, where the goal is to find the stimulation parameters that modulate hippocampal gamma power to a desired value. This framework proceeds in four steps: (a) collecting stimulation data, (b) creating high-throughput simulation models, (c) prototyping a range of different data-driven optimization algorithms and evaluating their performance, and (d) deploying the best performing algorithm in vivo. Main results. Following this framework, we prototype and design an algorithm specifically for finding the medial septum optogenetic stimulation parameters that maximize hippocampal gamma power. Building on this, we then change our objective function to find the stimulation parameters that modulate gamma to a specific setpoint, use the framework to understand and anticipate the results before deploying in vivo. Significance. We show that this framework can be used to design an effective optimization solution for a specific neural modulation problem, and discuss how it can potentially be applied beyond the optogenetic medial septum stimulation model.

19 January 2022 in Epilepsy Research
Verified
Journal Article
Closed access
AFAlejandra M. Fernandez
Alejandra M. Fernandez
CGClaire-Anne Gutekunst
Claire-Anne Gutekunst
DGDayton P. Grogan
Dayton P. Grogan
NPNigel P. Pedersen
Nigel P. Pedersen
RGRobert E. Gross
Robert E. Gross

15 July 2022
Verified
Book Chapter
Closed access
PDF file
MSMatthew A. Stern
Matthew A. Stern
HSHenry Skelton
Henry Skelton
AFAlejandra M. Fernandez
Alejandra M. Fernandez
CGClaire-Anne N. Gutekunst
Claire-Anne N. Gutekunst
RGRobert E. Gross
Robert E. Gross
KBKen Berglund
Ken Berglund