Beau J Fenner

Beau J Fenner


Research Focus & Metrics

Academic Career Length

15Years (2012-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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1 July 2025 in Nature Communications
Verified
Journal Article
Open access
MWMeng Wang
Meng Wang
TLTian Lin
Tian Lin
ALAidi Lin
Aidi Lin
KYKai Yu
Kai Yu
YPYuanyuan Peng
Yuanyuan Peng
HFHuazhu Fu
Huazhu Fu
Previous foundation models for fundus images were pre-trained with limited disease categories and knowledge base. Here we introduce RetiZero, a vision-language model that incorporates knowledge from over 400 fundus diseases. The model is pre-trained on 341,896 fundus images with accompanying text descriptions gathered from diverse sources across multiple ethnicities and countries. RetiZero demonstrates exceptional performance across various downstream tasks including zero-shot disease recognition, image-to-image retrieval, clinical diagnosis assistance, few-shot fine-tuning, and cross-domain disease identification. In zero-shot scenarios, it achieves Top-5 accuracies of 0.843 for 15 diseases and 0.756 for 52 diseases, while for image-to-image retrieval, it scores 0.950 and 0.886 respectively. Notably, RetiZero's Top-3 zero-shot performance exceeds the average diagnostic accuracy of 19 ophthalmologists from Singapore, China, and the United States. The model particularly enhances clinicians' ability to diagnose rare fundus conditions, highlighting its potential value for integration into clinical settings where diverse eye diseases are encountered.

15 December 2012 in Journal of Cell Science
Verified
Journal Article
Open access
PDF file
HKHans-Georg König
Hans-Georg König
BFBeau J Fenner
Beau J Fenner
JBJennifer C. Byrne
Jennifer C. Byrne
RSRobert F. Schwamborn
Robert F. Schwamborn
TBTytus Bernas
Tytus Bernas
Jochen PrehnJochen Prehn
Jochen Prehn
Summary: Neuronal survival and plasticity critically depend on constitutive activity of the transcription factor nuclear factor-κB (NF-κB). We here describe a role for a small intracellular fibroblast growth factor homologue, the fibroblast growth factor homologous factor 1 (FHF1/FGF12), in the regulation of NF-κB activity in mature neurons. FHFs have previously been described to control neuronal excitability, and mutations in FHF isoforms give rise to a form of progressive spinocerebellar ataxia. Using a protein-array approach, we identified FHF1b as a novel interactor of the canonical NF-κB modulator IKKγ/NEMO. Co-immunoprecipitation, pull-down and GAL4-reporter experiments, as well as proximity ligation assays, confirmed the interaction of FHF1 and NEMO and demonstrated that a major site of interaction occurred within the axon initial segment. Fhf1 gene silencing strongly activated neuronal NF-κB activity and increased neurite lengths, branching patterns and spine counts in mature cortical neurons. The effects of FHF1 on neuronal NF-κB activity and morphology required the presence of NEMO. Our results imply that FHF1 negatively regulates the constitutive NF-κB activity in neurons.

1 April 2020 in Ophthalmology Retina
Verified
Journal Article
Closed access
BFBeau J Fenner
Beau J Fenner
DTDaniel S.W. Ting
Daniel S.W. Ting
ATAnna C.S. Tan
Anna C.S. Tan
KTKelvin Yi Chong Teo
Kelvin Yi Chong Teo
CCChoi Mun Chan
Choi Mun Chan
CCChui Ming Gemmy Cheung
Chui Ming Gemmy Cheung

9 January 2026 in Nature Genetics
Verified
Journal Article
Open access
PDF file
MQMathieu Quinodoz
Mathieu Quinodoz
KRKim Rodenburg
Kim Rodenburg
ZCZuzana Cvackova
Zuzana Cvackova
KKKarolina Kaminska
Karolina Kaminska
SBSuzanne de Bruijn
Suzanne de Bruijn
CRCarlo Rivolta
Carlo Rivolta
Small nuclear RNAs (snRNAs) combine with specific proteins to generate small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. U4 snRNA forms a duplex with U6 and, together with U5, contributes to the tri-snRNP spliceosomal complex. Variants in RNU4-2, which encodes U4, have recently been implicated in neurodevelopmental disorders. Here we show that heterozygous inherited and de novo variants in RNU4-2 and in four RNU6 paralogs (RNU6-1, RNU6-2, RNU6-8 and RNU6-9), which encode U6, recur in individuals with nonsyndromic retinitis pigmentosa (RP), a genetic disorder causing progressive blindness. These variants cluster within the three-way junction of the U4/U6 duplex, a site that interacts with tri-snRNP splicing factors also known to cause RP (PRPF3, PRPF8, PRPF31), and seem to affect snRNP biogenesis. Based on our cohort, deleterious variants in RNU4-2 and RNU6 paralogs may explain up to ~1.4% of otherwise undiagnosed RP cases. This study highlights the contribution of noncoding RNA genes to Mendelian disease and reveals pleiotropy in RNU4-2, where distinct variants underlie neurodevelopmental disorder and retinal degeneration.

1 April 2021 in Experimental Eye Research
Verified
Journal Article
Closed access
BFBeau J Fenner
Beau J Fenner
AMAline Silveira Moriyama
Aline Silveira Moriyama
JMJodhbir S. Mehta
Jodhbir S. Mehta

20 December 2023 in American Journal of Ophthalmology
Verified
Journal Article
Open access
KTKelvin Yi Chong Teo
Kelvin Yi Chong Teo
JZJinzhi Zhao
Jinzhi Zhao
FIFarah Ilyana Ibrahim
Farah Ilyana Ibrahim
BFBeau J Fenner
Beau J Fenner
UCUsha Chakravarthy
Usha Chakravarthy
CCChui Ming Gemmy Cheung
Chui Ming Gemmy Cheung
To report the characteristics and correlation of visual acuity in eyes treated for neovascular age-related macular degeneration (nAMD) and developed fibrosis. Case-control study. Three hundred fifty-six treatment-naive nAMD eyes that were treated for 12 months were included. Fibrosis was defined as present if well-defined hyperreflective material (HRM) were present between the neurosensory retina and the Bruch membrane on optical coherence tomography (OCT) that correlated with well-defined regions of yellowish pallor on fundus photography and/or staining on fluorescence angiography. OCT features of subfoveal fibrosis and the overlying retina were correlated with visual acuity at month 12. Sixty-three eyes (20.3%) developed incident fibrosis at month 12. Compared with eyes that did not develop fibrosis, these eyes had lower baseline vision (49 vs 54 letters, P = .02) and more of them had type 2 macular neovascularization (15.0 vs 8.8%, P = .03), larger lesion area (29.6 vs 15.1 mm2, P = .02), and subretinal hemorrhage ≥4 disc diameters (44.4% vs 19.8%, P < .01). Visual acuity was worse in the incident fibrosis compared with the group that never developed fibrosis by month 12. (-1.4±17.1 versus +6.0±17.4 letters, P < .01). In 83 eyes that had subfoveal fibrosis, better vision was associated with intact ellipsoid zone-external limiting membrane complex (β coefficient 29.4, 95% CI 14.2-44.6, P < .01), whereas worse vision was associated with retinal pigment epithelium (RPE)-involving HRM, HRM above the RPE, and width of HRM (β coefficients -25.4 [95% CI -36.3 to -14.6], P < .01; -23.5 [95% CI -39.0 to -7.9], P < .01; and -3.8 [95% CI -7.2 to -0.4], P = .03, respectively). Although fibrosis is associated with poorer visual outcome, preservation of external limiting membrane and level of fibrosis relative to the RPE are associated with visual outcomes.