Modifying saline–alkali soil is crucial for ensuring food security and expanding arable land. Microorganisms play a key role in driving various biochemical processes in agricultural ecosystems. However, limited information exists on the changes in the microbial community and soil structure in soda saline-alkali soil under modified conditions. In this study, we examined the changes in soil physicochemical properties of saline–alkali soil altered by rice planting alone and by combined application of phosphogypsum in the Songnen Plain. The results demonstrated that phosphogypsum significantly improved the soil’s physicochemical properties; it notably reduced salinity and alkalinity while enhancing nutrient structure. Additionally, the utilization efficiency of carbon (C), nitrogen (N), and phosphorus (P) increased. Fungal community diversity also significantly improved, influenced mainly by soil water content (SWC), total organic carbon (TOC), soil organic matter (SOM), total nitrogen (TN) and sodium ion (Na⁺). TOC, SOM, TN, ESP, and Na⁺ served as the primary drivers affecting the fungal community. Our findings indicate that combining rice planting with phosphogypsum application effectively modifies saline–alkali soil, regulates fungal community structure, and enhances long-term soil health. Furthermore, the beneficial effects of phosphogypsum on saline–alkali soil persist for persists for several years, largely owing to its role in promoting microbial community growth.

Alkaline stress with high pH levels could significantly influence plant growth and survival. The enzyme 9-cis-epoxycarotenoid dioxygenase (NCED) serves as a critical bottleneck in the biosynthesis of abscisic acid (ABA), making it essential for regulating stress tolerance. Here, we show that OsNCED3-overexpressing rice lines have increased ABA content by up to 50.90% and improved transcription levels of numerous genes involved in stress responses that significantly enhance seedling survival rates. Overexpression of OsNCED3 increased the dry weight contents of the total chlorophyll, proline, soluble sugar, starch, and the activities of antioxidant enzymes of rice seedlings, while reducing the contents of O₂·⁻, H₂O₂, and malondialdehyde under hydroponic alkaline stress conditions simulated by 10, 15, and 20 mmol L⁻¹ of Na₂CO₃. Additionally, the OsNCED3-overexpressing rice lines exhibited a notable increase in the expression of OsNCED3; ABA response-related genes OsSalT and OsWsi18; ion homeostasis-related genes OsAKT1, OsHKT1;5, OsSOS1, and OsNHX5; and ROS scavenging-related genes OsCu/Zn-SOD, OsFe-SOD, OsPOX1, OsCATA, OsCATB, and OsAPX1 in rice seedling leaves. The results of these findings suggest that overexpression of OsNCED3 upregulates endogenous ABA levels and the expression of stress response genes, which represents an innovative molecular approach for enhancing the alkaline tolerance of rice seedlings.

The plant hormone abscisic acid (ABA) regulates the plant response to environmental stress; therefore, ABA priming is an effective strategy for enhancing stress tolerance in rice. In this study, we investigated the priming effects of 1 and 5 µM ABA on the biochemical and physiological traits associated with seedling growth performance in two rice cultivars exposed to saline (100 mM NaCl) and alkaline (15 mM Na₂CO₃) stress via root drenching. ABA pretreatment effectively reduced damage in rice seedlings by mitigating the increases in Na⁺/K⁺ ratio, membrane injury, contents of Na⁺, malondialdehyde, hydrogen peroxide, and superoxide anion radical, and prevented reductions in K⁺ and total chlorophyll contents, and ROS-related enzyme activities in both cultivars under saline and alkaline stresses. Rice seedlings with ABA pretreatment under alkaline stress had a stronger ability to maintain ion homeostasis, eliminate ROS, and induce changes in endogenous ABA levels via the upregulation of OsHKT1;5, OsSOS1, OsNHX5, OsPOX1, OsCATA, OsNCED3, OsSalT, and OsWsi18 and downregulation of OsRbohA than under saline stress. The saline–alkaline (SA)-sensitive cultivar demonstrated greater sensitivity to the priming effect of ABA than that of the SA-tolerant cultivar under both stress conditions. These findings have implications for rice adaptation to SA soils.

The improvement of saline-alkali land plays a key role in ensuring food security and promoting agricultural development. Saline soils modifies the response of the soil microbial community, but research is still limited. The effects of applying phosphogypsum with rice cultivation (PRC) on soil physicochemical properties and bacterial community in soda saline-alkali paddy fields in Songnen Plain, China were studied. The results showed that the PRC significantly improved the physicochemical properties of soil, significantly reduced the salinity, increased the utilization efficiency of carbon, nitrogen, and phosphorus, and significantly increased the activities of urease and phosphatase. The activities of urease and phosphatase were significantly correlated with the contents of total organic carbon and total carbon. A redundancy analysis showed that pH, AP, ESP, HCO₃⁻, and Na⁺ were dominant factors in determining the bacterial community structure. The results showed that PRC could improve soil quality and enhance the ecosystem functionality of soda saline-alkali paddy fields by increasing nutrient content, stimulating soil enzyme activity, and regulating bacterial community improvement. After many years of PRC, the soda-alkali soil paddy field still develops continuously and healthily, which will provide a new idea for sustainable land use management and agricultural development.

Global soil salinization threatens crop productivity, food security, and ecosystems. In Northeast China’s Songnen Plain, high-pH saline-sodic soils impose severe alkali stress on plants. The yield of rice (Oryza sativa) is severely restricted. Our study established gradient saline-alkali paddy fields with three different pH values (7.81, 8.52, and 9.23) to analyze the correlations among plant growth, soil microorganisms, and yield. After three years’experiments, the results revealed that increasing pH reduced the growth indicators of rice. Severe saline-alkali paddy fields experienced damaged rice root systems, and the Malondialdehyde (MDA) content and Reactive Oxygen Species (ROS) accumulation significantly increased. In the moderate saline-alkali paddy field, the root system enhanced the activity of antioxidant enzymes to alleviate the damage caused by the alkaline stress. High pH enhanced the CO₃²⁻, HCO₃⁻, and Na⁺ levels in the soil, but the soil nutrient indicators were reduced. The abundance and diversity of soil microorganisms also decreased with increasing pH and were strongly correlated with soil physical and chemical properties. Moreover, the theoretical yield and its constituent factors significantly decreased with increasing pH, along with reduced seed testing indicators. These findings provide a complete theoretical and practical basis for an in-depth and comprehensive clarification of the plant-soil-microbe synergistic mechanism affecting rice yield from multiple perspectives.