Jesse Potts

Mr. Jesse Potts

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Research Focus & Metrics

Academic Career Length

4Years (2023-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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3 November 2023 in Crops
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Journal Article
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JPJesse Potts
Jesse Potts
Sumit JangraSumit Jangra
Sumit Jangra
VMVincent Njung’e Michael
Vincent Njung’e Michael
XWXingbo Wu
Xingbo Wu
Amid a rapidly growing global population and increasing threats to crop yields, this review focuses on Speed Breeding (SB) in crop genetics. It traces SB’s development from carbon arc lamp experiments 150 years ago to its modern use with LED technology which significantly accelerates breeding cycles. SB has applications in genetic mapping, genetic modification, and trait stacking, enhancing crop resilience by leveraging allelic diversity. It aligns well with breeding methods like single plant selection and single seed descent. The integration of SB with gene editing, genotyping, and genomic selection holds great promise. However, SB faces challenges related to infrastructure, genotypic variations, and potential stress responses. In summary, SB is a powerful and promising approach to address food security concerns and advancing crop genetics.

14 March 2024 in Genes
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Journal Article
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JPJesse Potts
Jesse Potts
VMVincent Njung’e Michael
Vincent Njung’e Michael
Geoffrey MeruGeoffrey Meru
Geoffrey Meru
XWXingbo Wu
Xingbo Wu
MBMatthew Blair
Matthew Blair
Cowpea (Vigna unguiculata L. Walp) is an important grain legume crop of the subtropics, particularly in West Africa, where it contributes to the livelihoods of small-scale farmers. Despite being a drought-resilient crop, cowpea production is hampered by insect pests, diseases, parasitic weeds, and various abiotic stresses. Genetic improvement can help overcome these limitations, and exploring diverse cowpea genetic resources is crucial for cowpea breeding. This study evaluated the genetic diversity of 361 cowpea accessions from the USDA core collection for the species using 102 Kompetitive Allele Specific PCR (KASP) single nucleotide polymorphism (SNP) markers. A total of 102 KASP-SNP was validated in the germplasm panel, and 72 showed polymorphism across the germplasm panel. The polymorphism information content (PIC) of all SNPs ranged from 0.1 to 0.37, with an average of 0.29, while the mean observed heterozygosity was 0.52. The population structure revealed three distinct populations that clustered into two major groups after phylogenetic analysis. Analysis of molecular variance (AMOVA) indicated greater genetic variation within populations than among populations. Although cowpea generally has a narrow genetic diversity, the accessions used in this study exhibited considerable variation across geographical regions, sub-species, and improvement status. These results indicated that the selected KASP genotyping assay can provide robust and accurate genotyping data for application in the selection and management of cowpea germplasm in breeding programs and genebanks.

17 March 2026 in Nitrogen
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Journal Article
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ATAlejandra Taco
Alejandra Taco
JPJesse Potts
Jesse Potts
Bruce SchafferBruce Schaffer
Bruce Schaffer
PMPamela Moon
Pamela Moon
XWXingbo Wu
Xingbo Wu
YLYuncong Li
Yuncong Li
Nitrogen (N) management is a critical factor influencing growth and physiological performance of vanilla. However, quantitative information on N requirements for Vanilla × tahitensis remains limited. This study evaluated six N application rates (0, 2, 4, 8, 16, and 32 g N plant−1 yr−1) on tissue N partitioning, leaf chlorophyll index (LCI), vegetative growth, and biomass under controlled container conditions. Plants were arranged in a randomized complete block design (RCBD), and final analyses were conducted on destructively sampled plants (three plants per treatment; total n = 18). N concentration increased in all tissues with increasing N supply, but responses differed among tissues. Stem N concentration exhibited the greatest proportional increase at high N rates, whereas leaf N increased more gradually. Growth traits and LCI followed curvilinear patterns, with intermediate N rates generally associated with improved vegetative performance. Quadratic models estimated optimal N rates between 13 and 21 g N plant−1 yr−1, with predicted leaf N concentrations of 1.5–2.2%. However, confidence intervals indicated substantial uncertainty for variables with low model fit. LCI was strongly correlated with leaf N concentration, supporting its use as a nondestructive indicator of plant N status. Because the study was conducted under controlled conditions, field validation is required before broader recommendations are made.

25 March 2025 in Proteomes
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Journal Article
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PTPriya Thapa
Priya Thapa
JGJun Guo
Jun Guo
KPKajol Pradhan
Kajol Pradhan
DMDibya Thapa Magar
Dibya Thapa Magar
SMSudhakar Madhavarapu
Sudhakar Madhavarapu
TTTed Thannhauser
Ted Thannhauser
Background: Tomatoes are self-pollinating plants, and successful fruit set depends on the production of functional pollen within the same flower. Our previous studies have shown that the ‘Black Vernissage’ tomato variety exhibits greater resilience to heat stress in terms of pollen productivity compared to the ‘Micro-Tom’ variety. Pollen productivity is determined by meiotic activity during microsporogenesis and the development of free microspores during gametogenesis. This study focused on identifying heat stress (HS)-induced proteomes in pollen mother cells (PMCs) and microspores. Methods: Tomato plants were grown under two temperature conditions: 26 °C (non-heat-treated control) and 37 °C (heat-treated). Homogeneous cell samples of meiotic PMCs (prior to the tetrad stage) and free microspores were collected using laser capture microdissection (LCM). The heat-induced proteomes were identified using tandem mass tag (TMT)–quantitative proteomics analysis. Results: The enrichment of the meiotic cell cycle in PMCs and the pre-mitotic process in free microspores confirmed the correlation between proteome expression and developmental stage. Under HS, PMCs in both tomato varieties were enriched with heat shock proteins (HSPs). However, the ‘Black Vernissage’ variety exhibited a greater diversity of HSP species and a higher level of enrichment compared to the ‘Micro-Tom’ variety. Additionally, several proteins involved in gene expression and protein translation were downregulated in PMCs and microspores of both varieties. In the PMC proteomes, the relative abundance of proteins showed no significant differences between the two varieties under normal conditions, with very few exceptions. However, HS induced significant differential expression both within and between the varieties. More importantly, these heat-induced differentially abundant proteins (DAPs) in PMCs are directly involved in meiotic cell division, including the meiosis-specific protein ASY3 (Solyc01g079080), the cell division protein kinase 2 (Solyc11g070140), COP9 signalosome complex subunit 1 (Solyc01g091650), the kinetochore protein ndc80 (Solyc01g104570), MORC family CW-type zinc finger 3 (Solyc02g084700), and several HSPs that function in protecting the fidelity of the meiotic processes, including the DNAJ chaperone (Solyc04g009770, Solyc05g055160), chaperone protein htpG (Solyc04g081570), and class I and class II HSPs. In the microspores, most of the HS-induced DAPs were consistently observed across both varieties, with only a few proteins showing significant differences between them under heat stress. These HS-induced DAPs include proteases, antioxidant proteins, and proteins related to cell wall remodeling and the generation of pollen exine. Conclusions: HS induced more dynamic proteomic changes in meiotic PMCs compared to microspores, and the inter-varietal differences in the PMC proteomes align with the effects of HS on pollen productivity observed in the two varieties. This research highlights the importance of the cell-type-specific proteomics approach in identifying the molecular mechanisms that are critical for the pollen developmental process under elevated temperature conditions.

28 June 2023 in The Plant Phenome Journal
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Journal Article
Open access
David LeBauerDavid LeBauer
David LeBauer
ABAlexander Bucksch
Alexander Bucksch
JCJennifer Clarke
Jennifer Clarke
JPJesse Potts
Jesse Potts
SRSonali Roy
Sonali Roy
A key goal of the North American Plant Phenotyping Network (NAPPN) annual conference is to cultivate a new generation of scientists from diverse backgrounds. As part of their effort to diversify the plant phenomics research community, NAPPN acquired funding to cover all attendance costs for participants from historically black colleges and universities (HBCU) for the 2022 annual meeting. Seven award recipients represented the first attendees from HBCUs in the conference's 6‐year history. In this commentary, we report on the impact of the conference awards, including lessons learned, and the future of the award.

17 April 2026 in Preprints.org
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JPJesse Potts
Jesse Potts
VMVincent Njung’e Michael
Vincent Njung’e Michael
XWXingbo Wu
Xingbo Wu
Vanilla planifolia, a high-value tropical orchid, is significantly impacted by viral pathogens that threaten its cultivation and productivity. This study employs metagenomic technique to detect and characterize the viral communities associated with V. planifolia in south Florida. Using high-throughput RNA sequencing, the Cymbidium mosaic virus (CymMV) and Vanilla latent virus (VLV) were prevalent in the plant system, with CymMV being the dominant viral species. Phylogenetic analysis of the CymMV coat protein gene revealed notable genetic divergence in the Homestead isolate, forming a distinct clade from global reference strains, suggesting local adaptation or host-specific evolution. Viral distribution across plant system revealed higher viral loads in stem tissue, consistent with their role in systemic transport, whereas leaves exhibited greater viral diversity, likely due to in-creased environmental exposure. The low abundance of other viral species, including Garlic viruses and Senna severe yellow mosaic virus, highlights the complex viral ecology associated with V. planifolia. This study underscores the value of metagenomic approaches for uncovering both well-characterized and novel viruses in plant systems and highlight the need for continuous viral surveillance to guide disease management strategies in economically important crops such as vanilla.