Climate influences a variety of ecological processes. These effects operate through local weather parameters such as temperature, wind, rain, snow, and ocean currents, as well as interactions among these. In the temperate zone, local variations in weather are often coupled over large geographic areas through the transient behavior of atmospheric planetary-scale waves. These variations drive temporally and spatially averaged exchanges of heat, momentum, and water vapor that ultimately determine growth, recruitment, and migration patterns. Recently, there have been several studies of the impact of large-scale climatic forcing on ecological systems. We review how two of the best-known climate phenomena—the North Atlantic Oscillation and the El Niño–Southern Oscillation—affect ecological patterns and processes in both marine and terrestrial systems.

Journal homepage: http://www.int-res.com/journals/cr/Climate influences a population through a variety of processes, including reproduction, growth, migration patterns and phenology. Climate may operate either directly through metabolic and reproductive processes or indirectly through prey, predators, and competitors. One mechanism that may be particularly important, and which is the focus of this review, is the role of climate in affecting the reproductive success of a predator through its effect on the relative timing of food requirement and food availability during early life stages. This principle—the match or mismatch of predators’ requirement with resource availability—originated in the marine literature, where it initially referred to how growth and survival of fish larvae (predator) depends on this production being synchronous with that of their main food items, i.e. early stage zooplankton (prey). Here we review how the match/mismatch hypothesis (MMH) is used to describe climate effects on ecological patterns and processes in both marine and terrestrial systems. In addition to studying match/mismatch sensu stricto, we expand on it to include effects of overall production level and the spatial aspect. Possible impacts of climate change on match/mismatch are examined in the context of one of the most apparent effects of global warming: an advancement of spring phenology. As a consequence of different species reacting dissimilarly, even minor changes in climate may invoke non-linear responses unbalancing established patterns of synchrony. All components of a food chain cannot be expected to shift their phenology at the same rate, and thus are unlikely to remain synchronous

The genome of the Atlantic cod has been sequenced, and genomic analysis reveals an immune system that differs significantly from that in other vertebrates. The major histocompatibility complex (MHC) II has been lost, as have some other genes that are essential for MHC II function. But there is an expansion in the number of MHC I genes and a unique composition for its toll-like receptor family. These compensatory changes in both adaptive and innate immunity mean that cod is no more susceptible to disease than most other vertebrates. These findings challenge current models of vertebrate immune evolution, and may facilitate the development of targeted vaccines for disease management in aquaculture. Atlantic cod (Gadus morhua) is a large, cold-adapted teleost that sustains long-standing commercial fisheries and incipient aquaculture1,2. Here we present the genome sequence of Atlantic cod, showing evidence for complex thermal adaptations in its haemoglobin gene cluster and an unusual immune architecture compared to other sequenced vertebrates. The genome assembly was obtained exclusively by 454 sequencing of shotgun and paired-end libraries, and automated annotation identified 22,154 genes. The major histocompatibility complex (MHC) II is a conserved feature of the adaptive immune system of jawed vertebrates3,4, but we show that Atlantic cod has lost the genes for MHC II, CD4 and invariant chain (Ii) that are essential for the function of this pathway. Nevertheless, Atlantic cod is not exceptionally susceptible to disease under natural conditions5. We find a highly expanded number of MHC I genes and a unique composition of its Toll-like receptor (TLR) families. This indicates how the Atlantic cod immune system has evolved compensatory mechanisms in both adaptive and innate immunity in the absence of MHC II. These observations affect fundamental assumptions about the evolution of the adaptive immune system and its components in vertebrates.

Whereas the El Niño Southern Oscillation (ENSO) affects weather and climate variability worldwide, the North Atlantic Oscillation (NAO) represents the dominant climate pattern in the North Atlantic region. Both climate systems have been demonstrated to considerably influence ecological processes. Several other large–scale climate patterns also exist. Although less well known outside the field of climatology, these patterns are also likely to be of ecological interest. We provide an overview of these climate patterns within the context of the ecological effects of climate variability. The application of climate indices by definition reduces complex space and time variability into simple measures, ‘packages of weather’. The disadvantages of using global climate indices are all related to the fact that another level of problems are added to the ecology–climate interface, namely the link between global climate indices and local climate. We identify issues related to: (i) spatial variation; (ii) seasonality; (iii) non–stationarity; (iv) nonlinearity; and (v) lack of correlation in the relationship between global and local climate. The main advantages of using global climate indices are: (i) biological effects may be related more strongly to global indices than to any single local climate variable; (ii) it helps to avoid problems of model selection; (iii) it opens the possibility for ecologists to make predictions; and (iv) they are typically readily available on Internet.