Caio Almeida de Oliveira

Dr. Caio Almeida de Oliveira


Research Focus & Metrics

Academic Career Length

4Years (2023-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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22 August 2025 in Plants
Verified
Journal Article
Open access
PDF file
Renan FalcioniRenan Falcioni
Renan Falcioni
COCaio Almeida de Oliveira
Caio Almeida de Oliveira
NVNicole Ghinzelli Vedana
Nicole Ghinzelli Vedana
WMWeslei Augusto Mendonça
Weslei Augusto Mendonça
JGJoão Vitor Ferreira Gonçalves
João Vitor Ferreira Gonçalves
MNMarcos Rafael Nanni
Marcos Rafael Nanni
Soybean (Glycine max (L.) Merrill) is highly sensitive to water deficit, particularly during the vegetative phase, when morphological and metabolic plasticity support continued growth and photosynthetic efficiency. We applied eleven water regimes, from full irrigation (W100) to total water withholding (W0), to plants grown under controlled conditions. After 14 days, we quantified morphophysiological, biochemical, leaf optical, gas exchange, and chlorophyll a fluorescence traits. Drought induces significant reductions in leaf area, biomass, pigment pools, and photosynthetic rates (A, gs, ΦPSII) while increasing the levels of oxidative stress markers (electrolyte leakage, ROS) and proline accumulation. OJIP transients and JIP test metrics revealed reduced electron-transport efficiency and increased energy dissipation for many parameters under severe stress. Principal component analysis (PCA) clearly separated those treatments. PC1 captured growth and water status variation, whereas PC2 reflected photoprotective adjustments. These data show that progressive drought limits carbon assimilation via coordinated diffusive and biochemical constraints and that the accumulation of proline, phenolics, and lignin is associated with osmotic adjustment, antioxidant buffering, and cell wall reinforcement under stress. The combined use of hyperspectral sensors, gas exchange, chlorophyll fluorescence, and multivariate analyses for phenotyping offers a rapid, nondestructive diagnostic tool for assessing drought severity and the possibility of selecting drought-resistant genotypes and phenotypes in a changing stress environment.

28 September 2023 in Plants
Verified
Journal Article
Open access
PDF file
Renan FalcioniRenan Falcioni
Renan Falcioni
JGJoão Vitor Ferreira Gonçalves
João Vitor Ferreira Gonçalves
KOKarym Mayara de Oliveira
Karym Mayara de Oliveira
COCaio Almeida de Oliveira
Caio Almeida de Oliveira
ARAmanda Silveira Reis
Amanda Silveira Reis
MNMarcos Rafael Nanni
Marcos Rafael Nanni
Reflectance hyperspectroscopy is recognised for its potential to elucidate biochemical changes, thereby enhancing the understanding of plant biochemistry. This study used the UV-VIS-NIR-SWIR spectral range to identify the different biochemical constituents in Hibiscus and Geranium plants. Hyperspectral vegetation indices (HVIs), principal component analysis (PCA), and correlation matrices provided in-depth insights into spectral differences. Through the application of advanced algorithms—such as PLS, VIP, iPLS-VIP, GA, RF, and CARS—the most responsive wavelengths were discerned. PLSR models consistently achieved R2 values above 0.75, presenting noteworthy predictions of 0.86 for DPPH and 0.89 for lignin. The red-edge and SWIR bands displayed strong associations with pivotal plant pigments and structural molecules, thus expanding the perspectives on leaf spectral dynamics. These findings highlight the efficacy of spectroscopy coupled with multivariate analysis in evaluating the management of biochemical compounds. A technique was introduced to measure the photosynthetic pigments and structural compounds via hyperspectroscopy across UV-VIS-NIR-SWIR, underpinned by rapid multivariate PLSR. Collectively, our results underscore the burgeoning potential of hyperspectroscopy in precision agriculture. This indicates a promising paradigm shift in plant phenotyping and biochemical evaluation.

6 August 2024 in Remote Sensing
Verified
Journal Article
Open access
PDF file
KOKarym Mayara de Oliveira
Karym Mayara de Oliveira
JGJoão Vitor Ferreira Gonçalves
João Vitor Ferreira Gonçalves
RFRenato Furlanetto
Renato Furlanetto
COCaio Almeida de Oliveira
Caio Almeida de Oliveira
WMWeslei Augusto Mendonça
Weslei Augusto Mendonça
MNMarcos Rafael Nanni
Marcos Rafael Nanni
Modeling spectral reflectance data using machine learning algorithms presents a promising approach for estimating soil attributes. Nevertheless, a comprehensive investigation of the most effective models, parameters, wavelengths, and data acquisition techniques is essential to ensure optimal predictive accuracy. This work aimed to (a) explore the potential of the soil spectral signature obtained in different spectral bands (VIS-NIR, SWIR, and VIS-NIR-SWIR) and, by using hyperspectral imaging and non-imaging sensors, in the predictive modeling of soil attributes; and (b) analyze the accuracy of different ML models in predicting particle size and soil organic carbon (SOC) applied to the spectral signature of different spectral bands. Six soil monoliths, located in the central north region of Parana, Brazil, were collected and scanned via hyperspectral cameras (VIS-NIR camera and SWIR camera) and spectroradiometer (VIS-NIR-SWIR) in the laboratory. The spectral signature of the soils was analyzed and subsequently applied to ML models to predict particle size and SOC. Each set of data obtained by the different sensors was evaluated separately. The algorithms used were k-nearest neighbors (KNN), support vector machine (SVM), random forest (RF), linear regression (LR), artificial neural network (NN), and partial least square regression (PLSR). The most promising predictive performance was observed for the complete VIS-NIR-SWIR spectrum, followed by SWIR and VIS-NIR. Meanwhile, KNN, RF, and NN models were the most promising algorithms in estimating soil attributes for the dataset obtained from both sensors. The general mean R2 (determination coefficient) values obtained using these models, considering the different spectral bands evaluated, were around 0.99, 0.98, and 0.97 for sand prediction, and around 0.99, 0.98, and 0.96 for clay prediction. The lower performances, obtained for the datasets from both sensors, were observed for silt and SOC, with R2 results between 0.40 and 0.59 for these models. KNN demonstrated the best predictive performance. Integrating effective ML models with robust sample databases, obtained by advanced hyperspectral imaging and spectroradiometers, can enhance the accuracy and efficiency of soil attribute prediction.

11 October 2025 in Remote Sensing
Verified
Journal Article
Open access
PDF file
COCaio Almeida de Oliveira
Caio Almeida de Oliveira
NVNicole Ghinzelli Vedana
Nicole Ghinzelli Vedana
WMWeslei Augusto Mendonça
Weslei Augusto Mendonça
JGJoão Vitor Ferreira Gonçalves
João Vitor Ferreira Gonçalves
DMDheynne Heyre Silva de Matos
Dheynne Heyre Silva de Matos
Renan FalcioniRenan Falcioni
Renan Falcioni
The soybean Glycine max (L.) Merrill is a key crop in Brazil’s agricultural sector and is essential for both domestic food security and international trade. However, water stress severely impacts its productivity. In this study, we examined the physiological and biochemical responses of soybean plants to various water regimes via hyperspectral reflectance (350–2500 nm) and machine learning (ML) models. The plants were subjected to eleven distinct water regimes, ranging from 100% to 0% field capacity, over 14 days. Seventeen key physiological parameters, including chlorophyll, carotenoids, flavonoids, proline, stress markers and water content, and hyperspectral data were measured to capture changes induced by water deficit. Principal component analysis (PCA) revealed significant spectral differences between the water treatments, with the first two principal components explaining 88% of the variance. Hyperspectral indices and reflectance patterns in the visible (VIS), near-infrared (NIR), and shortwave-infrared (SWIR) regions are linked to specific stress markers, such as pigment degradation and osmotic adjustment. Machine learning classifiers, including random forest and gradient boosting, achieved over 95% accuracy in predicting drought-induced stress. Notably, a minimal set of 12 spectral bands (including red-edge and SWIR features) was used to predict both stress levels and biochemical changes with comparable accuracy to traditional laboratory assays. These findings demonstrate that spectroscopy by hyperspectral sensors, when combined with ML techniques, provides a nondestructive, field-deployable solution for early drought detection and precision irrigation in soybean cultivation.

7 October 2023 in Remote Sensing
Verified
Journal Article
Open access
PDF file
KOKarym Mayara de Oliveira
Karym Mayara de Oliveira
Renan FalcioniRenan Falcioni
Renan Falcioni
JGJoão Vitor Ferreira Gonçalves
João Vitor Ferreira Gonçalves
COCaio Almeida de Oliveira
Caio Almeida de Oliveira
WMWeslei Augusto Mendonça
Weslei Augusto Mendonça
MNMarcos Rafael Nanni
Marcos Rafael Nanni
In an effort to improve the efficiency of soil classification, traditional methods are being combined with analytical and computational techniques. This integration has strengthened the connection between conventional classification and the application of machine-learning (ML) models to interpret soil spectral reflectance data. Due to the time and computational cost, several studies are limited to testing the classification performance of a few algorithms and do not always explore the best parameters for model optimization. The study aims to assess the efficiency of combining soil spectral reflectance with prevalent ML models for classifying pedogenetic horizons and soil suborders, enhancing traditional classification methods. We collected seven soil monoliths, previously classified according to the Brazilian Soil Classification System (SiBCS) and soil taxonomy. Using the ASD Fieldspec spectroradiometer, we obtained spectral reflectance samples along each monolith (n = 800 per monolith) to classify horizons and n = 5600 for suborder classification. Spectral fingerprints were obtained and explored by Principal Component Analysis (PCA). The spectral data were subdivided into training (70%) and test (30%) sets and submitted to the Logistic Regression (LR), Artificial Neural Network (NN), Support Vector Machine (SVM), Random Forest (RF), and Gradient Boosting (GB) models for the classification of horizons and suborders, considering the model’s adjustment parameters. Accuracy and F-Score were used to verify the performance of the models. There was a significant influence of particle size and soil organic carbon on the spectral fingerprint of the soils. The PCA indicated that topsoil horizons clustered in most of the monoliths analyzed, while most of the subsoil horizons showed data overlap. The NN model showed the highest accuracy in the classification of horizons (97%), while the SVM showed the lowest performance (52% accuracy). The classification of soil suborders presented accuracies between 95% and 98%. Therefore, our study concludes that spectral data combined with ML models can enhance the discrimination and classification of soil horizons and suborders, improving upon traditional methods.

26 September 2024 in Remote Sensing Applications: Society and Environment
Verified
Journal Article
Closed access
KOKarym Mayara de Oliveira
Karym Mayara de Oliveira
JGJoão Vitor Ferreira Gonçalves
João Vitor Ferreira Gonçalves
Renan FalcioniRenan Falcioni
Renan Falcioni
COCaio Almeida de Oliveira
Caio Almeida de Oliveira
DHDaiane de Fatima da Silva Haubert
Daiane de Fatima da Silva Haubert
MNMarcos Rafael Nanni
Marcos Rafael Nanni