Ying Li

Dr. Ying Li

orcid

Research Focus & Metrics

Academic Career Length

21Years (2006-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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14 December 2023 in Plants
Verified
Journal Article
Open access
PDF file
YLYing Li
Ying Li
XZXia Zhang
Xia Zhang
KHKevin He
Kevin He
XSXinying SONG
Xinying SONG
JYJing Yu
Jing Yu
MXManlin Xu
Manlin Xu
Peanut root rot, caused by Fusarium spp., is a devastating fungal disease. As part of a program to obtain a biocontrol agent to control peanut root rot in the field, a bacterial strain LY-1 capable of inhibiting the growth of the fungus in vitro was isolated from rhizosphere soil samples collected from wild mint by agar disk dilution and dual-culture assay. Strain LY-1 was identified as Bacillus subtilis based on morphological characteristics, 16S rDNA, and gyrA sequence analyses. The bacterial suspension and cell-free culture filtrate of LY-1 could significantly inhibit the growth of Fusarium oxysporum, Fusarium proliferatum and Fusarium solani, but volatile organic compounds from the cultures had only a weak effect on mycelial growth. The percentage inhibition of 20% concentration of the cell-free culture filtrate of LY-1 on conidium production of each of the three Fusarium species was greater than 72.38%, and the percentage inhibition by the culture filtration on the germination of conidia of the three species was at least 62.37%. The production of extracellular enzyme activity by LY-1 was studied in functional assays, showing protease, cellulase, amylase, chitinase, and β-1,3-glucanase activity, while LY-1 contained a gene encoding iturin, an antifungal lipopeptide. In addition, under pot culture in a greenhouse, culture filtrate of LY-1 significantly promoted the growth of peanut, increasing the fresh and dry mass of the plant by 30.77% and 27.27%, respectively, in comparison with the no-filtrate control. The culture filtrate of LY-1 increased the resistance of peanut plants to F. oxysporum, with the biocontrol efficiency reaching 44.71%. In conclusion, B. subtilis LY-1, a plant-growth-promoting rhizobacterium, was able to protect peanuts from Fusarium spp. infection.

1 November 2021 in Plant Disease
Verified
Journal Article
Closed access
MXManlin Xu
Manlin Xu
XZXia Zhang
Xia Zhang
JYJing Yu
Jing Yu
ZGZhiqing Guo
Zhiqing Guo
YLYing Li
Ying Li
YCYucheng Chi
Yucheng Chi
Peanut (Arachis hypogaea L.) is one of the most economically important crops as an important source of edible oil and protein. In August 2020, circular to oval-shaped brown leaf spots (2-6 mm in diameter) with well-defined borders surrounded by a yellow margin were observed on peanut plant leaves in Laixi City, Shandong Province, China. Symptomatic plants randomly distributed in the field, the incidence was approximately 5%. Leave samples were collected consisted of diseased tissue and the adjacent healthy tissue. The samples were dipped in a 70% (v/v) ethanol solution for 30 s and then soaked in a 0.1% (w/v) mercuric chloride solution for 60 s. The surface-sterilized tissues were then rinsed three times with sterile distilled water, dried and placed on Czapek Dox agar supplemented with 100 μg/ml of chloramphenicol. The cultures were incubated in darkness at 25 °C for 3-5 days. Fungal colonies were initially white and radial, turning to orange-brown in color, with abundant aerial mycelia. Macroconidia were abundant, 4 to 7 septate, with a dorsiventral curvature, and were 3.3-4.5 × 18.5-38.1 μm (n=100) in size; microconidia were absent; chlamydospores were produced in chains or clumps, ellipsoidal to subglobose, and thick walled. The morphological characteristics of the conidia were consistent with those of Fusarium spp. To identify the fungus, an EasyPure Genomic DNA Kit (TransGEN, Beijing, China) was used to extract the total genomic DNA from mycelia. The internal transcribed spacer region (ITS rDNA) and the translation elongation factor 1-α gene (TEF1) were amplified with primers ITS1/ITS4 (White et al. 1990) and EF1/EF2 (O'Donnell et al. 1998), respectively. Based on BLAST analysis, sequences of ITS (MT928727) and TEF1 (MT952337) showed 99.64% and 100% similarity to the ITS (MT939248.1), TEF1 (GQ505636.1) of F. ipomoeae isolates. Sequence analysis confirmed that the fungus isolated from the infected peanut was F. ipomoeae (Xia et al. 2019). The pathogenicity of the fungus was tested in the greenhouse. Twenty two-week-old peanut seedlings (cv. Huayu20) grown in 20-cm pots (containing autoclaved soil) were sprayed with a conidial suspension (105 ml-1) from a 15-day-old culture. Control plants were sprayed with distilled water. The experiment was conducted as a randomized complete block design, and placed at 25 °C under a 12-h photoperiod with 90% humidity. Symptoms similar to those in the field were observed on leaves treated with the conidial suspension ten days after inoculation, but not on control plants. F. ipomoeae was re-isolated from symptomatic leaves but not from the control plants. Reisolation of F. ipomoeae from inoculated plants fulfilled Koch's postulates. To our knowledge, this is the first report of F. ipomoeae causing peanut leaf spot in China. Our report indicates the potential spread of this pathogen in China and a systematic survey is required to develop effective disease management strategies.

1 September 2023 in Plant Disease
Verified
Journal Article
Closed access
YLYing Li
Ying Li
JYJing Yu
Jing Yu
ZGZhiqing Guo
Zhiqing Guo
XSXinying SONG
Xinying SONG
MXManlin Xu
Manlin Xu
YCYucheng Chi
Yucheng Chi
Peanut (Arachis hypogaea L.) is one of the most economically important crops as a major source of edible oil and protein. In July 2021, a root rot disease was observed on peanut in Laiwu (36º22' N,...

1 May 2006 in Molecular Simulation
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Journal Article
Closed access
WSWei Shen
Wei Shen
Minghui LiMinghui Li
Minghui Li
HHHaiping Huang
Haiping Huang
YLYing Li
Ying Li
SWS. Wang
S. Wang
Density functional theory is used to study the geometries, electronic structure, aromaticity, the singlet/triplet splitting energies and the vertical ionization energy of tricyclic nonclassical thiophene, Thieno[3,4-f]isothianaphthene, and its five N-substitutes at B3LYP/aug-cc-PVDZ level of theory. Geometry studies show that all of the compounds have a highly symmetric structure with a rigid planar. Calculated results confirm that there exists considerable conjugation and aromaticity over the rings and those tricyclic nonclassical thiophenes may be candidates for conductive polymers. The studies of electronic structure and splitting energies show that those nonclassical thiophenes have more or less a diradical structure.

21 June 2025 in Journal of Fungi
Verified
Journal Article
Open access
PDF file
YLYing Li
Ying Li
XZXia Zhang
Xia Zhang
XSXinying SONG
Xinying SONG
MXManlin Xu
Manlin Xu
KHKevin He
Kevin He
ZGZhiqing Guo
Zhiqing Guo
Peanut root rot poses a significant threat to global peanut production. In order to identify the new pathogen of peanut root rot in Shandong province, China, and to screen the effective antagonistic biocontrol strains against the identified pathogen, ten symptomatic plants from a peanut field (10% disease incidence) of Rongcheng were sampled for pathogen isolation. The predominant isolate RC-103 was identified as Ceratobasidium sp. AG-A through morphological characterization and phylogenetic analysis of ITS and RPB2 sequences. Pathogenicity was confirmed via Koch’s postulates. Three potent biocontrol strains, namely Bacillus subtilis LY-1, Bacillus velezensis ZHX-7, and Burkholderia cepacia Bc-HN1, were screened for effective antagonism against isolate RC-103 by dual-culture analysis. Their cell suspensions could significantly inhibit the hyphal growth of isolate RC-103, with the percentage inhibition of 54.70%, 45.86%, and 48.62%, respectively. Notably, the percentage inhibition of 10% concentration of the cell-free culture filtrate of B. subtilis LY-1 was as high as 59.01%, and the inhibition rate of volatile organic compounds of B. cepacia Bc-HN1 was 48.62%. Antagonistic mechanisms primarily involved the induction of hyphal abnormalities. In addition, the culture filtrate of these biocontrol bacteria significantly promoted the growth of peanut and increased the resistance of peanut plants to isolate RC-103, with the biocontrol efficiency reaching 41.86%. In summary, this study identified a novel pathogen of peanut root rot, Ceratobasidium sp. AG-A, which was reported for the first time in China, and screened three highly effective antagonistic biocontrol strains against Ceratobasidium sp. AG-A isolate RC-103, providing the scientific basis to study the epidemiology and management of this disease.

1 February 2024 in Plant Disease
Verified
Journal Article
Closed access
YLYing Li
Ying Li
XSXinying SONG
Xinying SONG
KHKevin He
Kevin He
JYJing Yu
Jing Yu
MXManlin Xu
Manlin Xu
XZXia Zhang
Xia Zhang
In July 2022, dieback and discoloration were detected on infected stems of peanut in Qijiang District of Chongqing (106.56°E,29.41°N), China, with an incidence up to 5%. These peanut stems had disease symptoms typical of anthracnose with irregular gray-brown spots with dark brown edges, sunken, and necrotic. High temperature and high humidity were favorable for the growth of the pathogen. To isolate the pathogen, we collected 10 typical infected peanuts and cut one piece from each of symptomatic stems, surface sterilized with 0.5% NaClO for 1 min, and 75% ethanol for 30 s, then rinsed three times with sterile distilled water and dried on sterilized filter paper. These pieces were incubated on potato dextrose agar (PDA) at 25°C in the dark. Pure cultures were obtained from hyphal tips of each colony. It was found that isolates with the same colony morphology were isolated from each infected stem. A representative isolate (L7) was used for morphological characterization, molecular analysis, phylogenetic analysis, and pathogenicity tests. The colonies appeared white to gray, with white margins and aerial hyphae, and the reverse of the colonies was gray to brown. Conidia were cylindrical, aseptate, with obtuse to slightly rounded ends, 13.4 to 18.8 × 4.2 to 5.8 μm (n=50). Morphological characteristics were generally consistent with those of Colletotrichum gloeosporioides species complex (Cannon et al., 2012). For molecular identification, genomic DNA was extracted using a CTAB method and partial sequences of β-tubulin (TUB2), actin (ACT) genes, chitin synthase (CHS) and glyceraldehyde-3-phosphate dehydrogenase (GAPDH) genes were amplified and sequenced using primers T1/T2, ACT-512F/ACT-783R, CHS-79F/CHS-345R, and GDF1/GDR1, respectively (Damm et al., 2012; Dowling et al., 2020). Using the BLAST, TUB2, ACT, CHS and GAPDH gene sequences (GenBank accession No. OR714793, OP168707, OP168708 and OR714794, respectively) were100% (429 bp out of 429 bp), 99.22% (256 bp out of 258 bp), 99.64% (276 bp out of 277 bp) and 100% (253 bp out of 253 bp) identical to C. gloeosporioides CBS:112999 (JQ005587, JQ005500, JQ005326, and JQ005239), respectively. Using Neighbor-Joining algorithm, phylogenetic analysis was conducted based on the concatenated sequences of published TUB2, ACT, CHS and GAPDH genes. The identified isolate (L7) was closely related to C. gloeosporioides. To evaluate pathogenicity, the stems of ten peanut (Zhonghua12) seedlings (2 weeks) were wounded with a sterile toothpick and mycelial plugs (5 mm in diameter) or 20 μl of conidial suspension (105/ml) were inoculated. Non-colonized agar plugs or 20 μl of sterile distilled water were treated as control. After inoculation, the peanuts were kept in a moist chamber at 28°C with 80% humidity in the dark for 24 h, and subsequently transferred to the moist chamber with 12 h light and darkness cycle for 6 days, similar symptoms were observed on all inoculated peanuts. Controls remained asymptomatic. C. gloeosporioides was reisolated from the diseased stems and confirmed using morphological features and sequence analysis of TUB2, ACT, CHS and GAPDH. Anthracnose caused by C. truncatum and C. fructicola has been reported on peanut leaves in China (Gong et al., 2023; Yu et al., 2019). To our knowledge, this is the first report of anthracnose on peanut stem caused by C. gloeosporioides in Chongqing. Our report will provide crucial information for studying on epidemiology and management of this disease.