In fly photoreceptors, light is focused onto a photosensitive waveguide, the rhabdomere, consisting of tens of thousands of microvilli. Each microvillus is capable of generating elementary responses, quantum bumps, in response to single photons using a stochastically operating phototransduction cascade. Whereas much is known about the cascade reactions, less is known about how the concerted action of the microvilli population encodes light changes into neural information and how the ultrastructure and biochemical machinery of photoreceptors of flies and other insects evolved in relation to the information sampling and processing they perform. We generated biophysically realistic fly photoreceptor models, which accurately simulate the encoding of visual information. By comparing stochastic simulations with single cell recordings from Drosophila photoreceptors, we show how adaptive sampling by 30,000 microvilli captures the temporal structure of natural contrast changes. Following each bump, individual microvilli are rendered briefly (~100-200 ms) refractory, thereby reducing quantum efficiency with increasing intensity. The refractory period opposes saturation, dynamically and stochastically adjusting availability of microvilli (bump production rate: sample rate), whereas intracellular calcium and voltage adapt bump amplitude and waveform (sample size). These adapting sampling principles result in robust encoding of natural light changes, which both approximates perceptual contrast constancy and enhances novel events under different light conditions, and predict information processing across a range of species with different visual ecologies. These results clarify why fly photoreceptors are structured the way they are and function as they do, linking sensory information to sensory evolution and revealing benefits of stochasticity for neural information processing.
Using time-lapse imaging, we have identified a series of bottlenecks that restrict growth of early-passage human embryonic stem cells (hESCs) and that are relieved by karyotypically abnormal variants that are selected by prolonged culture. Only a minority of karyotypically normal cells divided after plating, and these were mainly cells in the later stages of cell cycle at the time of plating. Furthermore, the daughter cells showed a continued pattern of cell death after division, so that few formed long-term proliferating colonies. These colony-forming cells showed distinct patterns of cell movement. Increasing cell density enhanced cell movement facilitating cell:cell contact, which resulted in increased proportion of dividing cells and improved survival postplating of normal hESCs. In contrast, most of the karyotypically abnormal cells reentered the cell cycle on plating and gave rise to healthy progeny, without the need for cell:cell contacts and independent of their motility patterns.
Two air pollutants, oxides of nitrogen (NOx) and particulate matter (PM10), are monitored and modelled employing Airviro air quality dispersion modelling system in Sheffield, United Kingdom. The aim is to determine the most significant emission sources and their spatial variability. NOx emissions (ton/year) from road traffic, point and area sources for the year 2017 were 5370, 6774, and 2425, whereas those of PM10 (ton/year) were 345, 1449, and 281, respectively, which are part of the emission database. The results showed three hotspots of NOx, namely the Sheffield City Centre, Darnall and Tinsley Roundabout (M1 J34S). High PM10 concentrations were shown mainly between Sheffield Forgemasters International (a heavy engineering steel company) and Meadowhall Shopping Centre. Several emission scenarios were tested, which showed that NOx concentrations were mainly controlled by road traffic, whereas PM10 concentrations were controlled by point sources. Spatiotemporal variability and public exposure to air pollution were analysed. NOx concentration was greater than 52 µg/m3 in about 8 km2 area, where more than 66 thousand people lived. Models validated by observations can be used to fill in spatiotemporal gaps in measured data. The approach used presents spatiotemporal situation awareness maps that could be used for decision making and improving the urban infrastructure.
Integrate-and-fire neurons are time encoding machines that convert the amplitude of an analog signal into a nonuniform, strictly increasing sequence of spike times. Under certain conditions, the encoded signals can be reconstructed from the nonuniform spike time sequences using a time decoding machine. Time encoding and time decoding methods have been studied using the nonuniform sampling theory for band-limited spaces, as well as for generic shift-invariant spaces. This letter proposes a new framework for studying IF time encoding and decoding by reformulating the IF time encoding problem as a uniform sampling problem. This framework forms the basis for two new algorithms for reconstructing signals from spike time sequences. We demonstrate that the proposed reconstruction algorithms are faster, and thus better suited for real-time processing, while providing a similar level of accuracy, compared to the standard reconstruction algorithm.
Small-scale spatial variability in NO2 concentrations is analysed with the help of pollution maps. Maps of NO2 estimated by the Airviro dispersion model and land use regression (LUR) model are fused with measured NO2 concentrations from low-cost sensors (LCS), reference sensors and diffusion tubes. In this study, geostatistical universal kriging was employed for fusing (integrating) model estimations with measured NO2 concentrations. The results showed that the data fusion approach was capable of estimating realistic NO2 concentration maps that inherited spatial patterns of the pollutant from the model estimations and adjusted the modelled values using the measured concentrations. Maps produced by the fusion of NO2-LCS with NO2-LUR produced better results, with r-value 0.96 and RMSE 9.09. Data fusion adds value to both measured and estimated concentrations: the measured data are improved by predicting spatiotemporal gaps, whereas the modelled data are improved by constraining them with observed data. Hotspots of NO2 were shown in the city centre, eastern parts of the city towards the motorway (M1) and on some major roads. Air quality standards were exceeded at several locations in Sheffield, where annual mean NO2 levels were higher than 40 µg/m3. Road traffic was considered to be the dominant emission source of NO2 in Sheffield.
Land Use Regression (LUR) based on multiple linear regression model is one of the techniques used most frequently for modelling the spatial variability of air pollution and assessing exposure in urban areas. In this paper, a nonlinear generalised additive model is proposed for LUR and its performance is compared to a linear model in Sheffield, UK for the year 2019. Pollution models were estimated using NO2 measurements obtained from 188 diffusion tubes and 40 low-cost sensors. Performance of the models was assessed by calculating several statistical metrics including correlation coefficient (R) and root mean square error (RMSE). High resolution (100 m × 100 m) maps demonstrated higher levels of NO2 in the city centre, eastern side of the city and on major roads. The results showed that the nonlinear model outperformed the linear counterpart and that the model estimated using NO2 data from diffusion tubes outperformed the models using data from low-cost sensors or both low-cost sensors and diffusion tubes. The proposed method provides a basis for further application of advanced nonlinear modelling approaches to constructing LUR models in urban areas which enable quantifying small scale variability in pollution levels.