Advancements in precision livestock technology have resulted in an unprecedented amount of data being collected on individual animals. Throughout the data analysis chain, many bottlenecks occur, including processing raw sensor data, integrating multiple streams of information, incorporating data into animal growth and nutrition models, developing decision support tools for producers, and training animal science students as data scientists. To realize the promise of precision livestock management technologies, open-source tools and tutorials must be developed to reduce these bottlenecks, which are a direct result of the tremendous time and effort required to create data pipelines from scratch. Open-source programming languages (e.g., R or Python) can provide users with tools to automate many data processing steps for cleaning, aggregating, and integrating data. However, the steps from data collection to training artificial intelligence models and integrating predictions into mathematical models can be tedious for those new to statistical programming, with few examples pertaining to animal science. To address this issue, we outline how open-source code can help overcome many of the bottlenecks that occur in the era of big data and precision livestock technology, with an emphasis on how routine use and publication of open-source code can help facilitate training the next generation of animal scientists. In addition, two case studies are presented with publicly available data and code to demonstrate how open-source tutorials can be utilized to streamline data processing, train machine learning models, integrate with animal nutrition models, and facilitate learning. The National Animal Nutrition Program focuses on providing research-based data on animal performance and feeding strategies. Open-source data and code repositories with examples specific to animal science can help create a reinforcing mechanism aimed at advancing animal science research.

The objective was to determine if low- or high-residual feed intake (LRFI or HRFI, n = 24 for each) Hereford × Angus cows on continuously or rotationally grazed rangeland altered their grazing behavior when provided a protein supplement in late autumn. Treatments included continuously grazed, control (CCON, n = 12); continuously grazed, supplemented (CTRT, n = 12); rotationally grazed, control (RCON, n = 12); and rotationally grazed, supplemented pastures (RTRT, n = 12). Cows in each treatment had grazing time (GT), resting time (RT), and walking time (WLK) measured for 2 years with accelerometers. Bite rate (BR) was also measured. Time distributions of GT and RT differed by year (p < 0.05), being influenced by colder temperatures in 2016. Cattle in 2016 spent more time grazing during early morning and late evening (p < 0.05) and rested more during the day (p < 0.05). In 2017, cattle in the CCON treatment walked more (p < 0.05) during early morning time periods than did the CTRT cattle, indicative of search grazing. All supplemented cattle had greater BR (p < 0.05) than control cattle in 2017. Cattle with increased nutritional demands alter grazing behavior in a compensatory fashion when grazing late-season rangelands.

An essential component required for calculating stocking rates for livestock grazing extensive rangeland is dry matter intake (DMI). Animal unit months are used to simplify this calculation for rangeland systems to determine the rate of forage consumption and the cattle grazing duration. However, there is an opportunity to leverage precision technology deployed on rangeland systems to account for the individual animal variation of DMI and subsequent impacts on herd-level decisions regarding stocking rate. Therefore, the objectives of this study were, first, to build a precision system model (PSM) to predict total DMI (kg) and required pasture area (ha) using precision body weight (BW), and second, to evaluate differences in PSM-predicted stocking rates compared to the traditional herd-level method using initial or estimated mid-season BW. A deterministic model was constructed in both Vensim (version 10.1.2) and Program R (version 4.2.3) to incorporate individual precision BW data into a commonly used rangeland equation using %BW to estimate individual DMI, daily herd DMI, and area (ha) required to meet animal DMI requirements throughout specific grazing periods. Using the PSM, differences in outputs were evaluated using three scenarios: (1) initial BW (business as usual); (2) average mid-season BW; and (3) individual precision BW using data from two precision rangeland experiments conducted at the South Dakota State University Cottonwood Field Station. The data from the two experiments were used to develop PSM case studies. The trial data were collected using precision weight data (SmartScale™) collected from replacement heifers (Case study 1, n = 60) and steers (Case study 2, n = 254) grazing native rangeland. In Case study 1 (heifers), Scenario 1 versus Scenario 3 resulted in an additional 73.41 ha required. Results from Case study 2 indicated an average additional 4.4 ha required per pasture when comparing Scenario 3 versus Scenario 1. Sensitivity analyses resulted in a difference between maximum and minimum simulated values of 27,995 and 4265 kg forage consumed, and 122 and 8.9 pasture ha required for Case studies 1 and 2, respectively. Thus, results from the scenarios indicate an opportunity to identify both under- and over-stocking situations using precision DMI estimates, which helps to identify high-leverage precision tools that have practical applications for enhancing animal and plant productivity and environmental sustainability on extensive rangelands.

Black-tailed prairie dogs (Cynomys ludovicianus) have been described as a keystone species and are important for grassland conservation, yet many concerns exist over the impact of prairie dogs on plant biomass production and consequently livestock production. The ability to map plant communities in pastures colonized by prairie dogs can provide land managers with an opportunity to optimize rangeland production while balancing conservation goals. The aim of this study was to test the ability of random forest (RF) models to classify five plant communities located on and off prairie dog towns in mixed-grass prairie landscapes of north central South Dakota, assess the stability of RF models among different years, and determine the utility of utilizing remote sensing techniques to identify prairie dog colony extent. During 2015 and 2016, Pleiades satellites were tasked to image the study site for a total of five monthly collections each summer (June–October). Training polygons were mapped in 2016 for the five plant communities and used to train RF models. Both the 2015 and 2016 RF models had low (1 %) out-of-bag error rates. However, comparisons between the predicted plant community maps using the 2015 imagery and one created with the 2016 imagery indicate over 32.9 % of pixels changed plant community class between 2015 and 2016. The results show that while RF models may predict with a high degree of accuracy, overlap of plant communities and interannual differences in rainfall may cause instability in fitted models. A final RF model combining both 2015 and 2016 data yielded the lowest error rates and was also highly accurate in determining prairie dog colony boundaries.

On the Ground•One objective of the ongoing “Renewal on Standing Rock Reservation” project is to evaluate the response of grazing steers to the level of prairie dog colonization on Northern Mixed Grass Prairie.•We fenced four pastures to create an increasing gradient of a proportion of the pasture area colonized by prairie dogs. Pastures are stocked with yearling steers during each growing season.•Comparing steer performance, Global Positioning System (GPS) locations of grazing, diet samples, and ingestive behavior at each proportion of the prairie dog colony per pasture allows prediction of the optimal proportion of colonization, which enables selection of the most balanced diet for cattle to meet performance goals.•Additionally, it will allow recommendation of management options for any given level of prairie dog colonization to optimize cattle nutrient intake