Raja M. Flores

Dr. Raja M. Flores


Research Focus & Metrics

Academic Career Length

29Years (1998-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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26 August 2022 in Cancer Discovery
Verified
Journal Article
Open access
PDF file
JGJohn A. Grout
John A. Grout
PSPhilemon Sirven
Philemon Sirven
ALAndrew M. Leader
Andrew M. Leader
SMShrisha Maskey
Shrisha Maskey
EHEglantine Hector
Eglantine Hector
HSHélène Salmon
Hélène Salmon
It is currently accepted that cancer-associated fibroblasts (CAF) participate in T-cell exclusion from tumor nests. To unbiasedly test this, we used single-cell RNA sequencing coupled with multiplex imaging on a large cohort of lung tumors. We identified four main CAF populations, two of which are associated with T-cell exclusion: (i) MYH11+αSMA+ CAF, which are present in early-stage tumors and form a single cell layer lining cancer aggregates, and (ii) FAP+αSMA+ CAF, which appear in more advanced tumors and organize in patches within the stroma or in multiple layers around tumor nests. Both populations orchestrate a particular structural tissue organization through dense and aligned fiber deposition compared with T cell–permissive CAF. Yet they produce distinct matrix molecules, including collagen IV (MYH11+αSMA+ CAF) and collagen XI/XII (FAP+αSMA+ CAF). Hereby, we uncovered unique molecular programs of CAF driving T-cell marginalization, whose targeting should increase immunotherapy efficacy in patients bearing T cell–excluded tumors. Significance: The cellular and molecular programs driving T-cell marginalization in solid tumors remain unclear. Here, we describe two CAF populations associated with T-cell exclusion in human lung tumors. We demonstrate the importance of pairing molecular and spatial analysis of the tumor microenvironment, a prerequisite to developing new strategies targeting T cell–excluding CAF. See related commentary by Sherman, p. 2501. This article is highlighted in the In This Issue feature, p. 2483

22 October 2018 in Journal of Clinical Investigation
Verified
Journal Article
Closed access
PDF file
HCHui-Ming Chen
Hui-Ming Chen
WTWilliam van der Touw
William van der Touw
YWYuan Shuo Wang
Yuan Shuo Wang
KKKyeongah Kang
Kyeongah Kang
SMSunny Mai
Sunny Mai
SCShu-hsia Chen
Shu-hsia Chen
Tumor-associated myeloid cells maintain immunosuppressive microenvironments within tumors. Identification of myeloid-specific receptors to modulate tumor-associated macrophage and myeloid-derived suppressor cell (MDSC) functions remains challenging. The leukocyte immunoglobulin-like receptor B (LILRB) family members are negative regulators of myeloid cell activation. We investigated how LILRB targeting could modulate tumor-associated myeloid cell function. LILRB2 antagonism inhibited receptor-mediated activation of SHP1/2 and enhanced proinflammatory responses. LILRB2 antagonism also inhibited AKT and STAT6 activation in the presence of M-CSF and IL-4. Transcriptome analysis revealed that LILRB2 antagonism altered genes involved in cell cytoskeleton remodeling, lipid/cholesterol metabolism, and endosomal sorting pathways, as well as changed differentiation gene networks associated with inflammatory myeloid cells as opposed to their alternatively activated phenotype. LILRB2 blockade effectively suppressed granulocytic MDSC and Treg infiltration and significantly promoted in vivo antitumor effects of T cell immune checkpoint inhibitors. Furthermore, LILRB2 blockade polarized tumor-infiltrating myeloid cells from non–small cell lung carcinoma tumor tissues toward an inflammatory phenotype. Our studies suggest that LILRB2 can potentially act as a myeloid immune checkpoint by reprogramming tumor-associated myeloid cells and provoking antitumor immunity.

1 February 2015 in The Annals of Thoracic Surgery
Verified
Journal Article
Closed access
emanuela taioliemanuela taioli
emanuela taioli
AWAndrea S. Wolf
Andrea S. Wolf
RFRaja M. Flores
Raja M. Flores

14 December 2015 in PLOS ONE
Verified
Journal Article
Open access
PDF file
ETEmanuela Taioli
Emanuela Taioli
AWAndrea S. Wolf
Andrea S. Wolf
MCMarlene Camacho-Rivera
Marlene Camacho-Rivera
AKAndrew Kaufman
Andrew Kaufman
DLDong-Seok Lee
Dong-Seok Lee
RFRaja M. Flores
Raja M. Flores
Left untreated, malignant pleural mesothelioma (MPM) is associated with uniformly poor prognosis. Better survival has been reported with surgery-based multimodality therapy, but to date, no trial has demonstrated survival benefit of surgery over other therapies. We evaluated whether cancer-directed surgery influenced survival independently from other predictors in a large population-based dataset. The SEER database was explored from 1973 to 2009 to identify all cases of pathologically-proven MPM. Age, sex, race, year of diagnosis, histology stage, cancer-directed surgery, radiation, and vital status were analyzed. The association between prognostic factors and survival was estimated using Cox regression and propensity matched analysis. There were 14,228 patients with pathologic diagnosis of MPM. On multivariable analysis, female gender, younger age, early stage, and treatment with surgery were independent predictors of longer survival. In comparison to no treatment, surgery alone was associated with significant improvement in survival [adjusted hazard ratio (adj HR) 0.64 (0.61–0.67)], but not radiation [adj HR 1.15 (1.08–1.23)]. Surgery and radiation combined had similar survival as surgery alone [adj HR 0.69 (0.64–0.76)]. Results were similar when cases diagnosed between 1973 and 1999 were compared to cases diagnosed between 2000 and 2009. Despite developments in surgical and radiation techniques, the prognosis for MPM patients has not improved over the past 4 decades. Cancer-directed surgery is independently associated with better survival, suggesting that multimodal surgery-based therapy can benefit these patients. Further research in adjuvant treatment is necessary to improve prognosis in this challenging disease.

1 December 2011 in The Journal of Thoracic and Cardiovascular Surgery
Verified
Journal Article
Closed access
RFRaja M. Flores
Raja M. Flores
UIUgonna Ihekweazu
Ugonna Ihekweazu
JDJoseph Dycoco
Joseph Dycoco
NRNabil P. Rizk
Nabil P. Rizk
VRValerie W. Rusch
Valerie W. Rusch
BPBernard Park
Bernard Park

17 December 2021 in JAMA Network Open
Verified
Journal Article
Open access
PDF file
RFRaja M. Flores
Raja M. Flores
PPParth Patel
Parth Patel
NANaomi Alpert
Naomi Alpert
BPBruce Pyenson
Bruce Pyenson
ETEmanuela Taioli
Emanuela Taioli
Lung cancer remains among the leading causes of cancer death in the United States.1,2 Based on the Annual Report to the Nation, incidence rates for lung cancer have significantly declined from 2012 to 2016 (average annual percent change [AAPC] of −2.6% for male individuals and −1.1% for female individuals).1 Moreover, mortality for lung cancer from 2013 to 2017 has decreased at a greater rate compared with the incidence and has experienced one of the largest declines in death rates compared with other common cancer deaths (AAPC of −4.8% among male individuals and −3.7% among female individuals).1 The improved outcomes with lung cancer are quite multifactorial and can be attributed to advances in prevention, early detection, and treatment of lung cancer.3,4