Chengli Liu

Chengli Liu


Research Focus & Metrics

Academic Career Length

13Years (2014-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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28 February 2014 in Tumor Biology
Verified
Journal Article
Closed access
PDF file
CLChengli Liu
Chengli Liu
YWYingjie Wang
Yingjie Wang
HHHui Huang
Hui Huang
CWCheng Wang
Cheng Wang
HZHui Zhang
Hui Zhang
HZHongyi Zhang
Hongyi Zhang

16 March 2021 in Animal Biotechnology
Verified
Journal Article
Closed access
RNRisu Na
Risu Na
YZYan Zeng
Yan Zeng
YHYanguo Han
Yanguo Han
CLChengli Liu
Chengli Liu
BYBaigao Yang
Baigao Yang
YHYongmeng He
Yongmeng He
How multiple ovulations happen in prolific goats is still unknown even though studies on ovarian physiology and folliculogenesis have made extensive progress. MicroRNAs (miRNAs) are a class of endogenous regulatory factors and regulate structural gene expression mainly at the post-transcriptional level. In this study, in the follicular phase, six large follicles were collected from prolific Dazu black goat and used to generate RNA libraries for RNA sequencing. Based on the litter size and average number of ovulatory follicles in Dazu black goats, the largest three follicles were sorted as ovulatory follicles, and the remaining as subordinate ones. In total, 418 known miRNAs and 110 novel miRNAs were found, and the expression of six randomly selected miRNAs was validated by quantitative PCR analysis. Nine miRNAs were differently expressed between the ovulatory and subordinate follicles (p < 0.01). Chi-miR-582-5p, novel-130, chi-miR-214-3p, and chi-miR-500-5p were upregulated in the ovulatory group, and chi-miR-383, chi-miR-130b-5p, chi-miR-92a-3p, chi-miR-125b-5p, and novel-9 were downregulated in the same group. Chi-miR-130b-5p and chi-miR-214-3p were predicted to target at LHR (XM_013967581.1), GDF9 (NM_001285708.1), BMP15 (NM_001285588.1), and CYP19A1 (XM_013967046.1). In conclusion, nine miRNAs were differently expressed between ovulatory and subordinate follicles, and chi-miR-130b-5p and chi-miR-214-3p were predicted to regulate the expression of genes involved in gonadotropin hormone signaling and oocyte-derived growth factors. Additional studies are needed to confirm these findings.

25 June 2024 in PLOS ONE
Verified
Journal Article
Open access
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LLLuyang Li
Luyang Li
CLChengli Liu
Chengli Liu
TXTian Xia
Tian Xia
HLHaoming Li
Haoming Li
JYJun Yang
Jun Yang
TZTao Zhang
Tao Zhang
Background: The relationship between plant-based diets and gallstone disease has been debated. This study aimed to shed light on the association between plant-based dietary index and the risk of developing gallstone disease. Methods: Eligible participants were selected from National Health and Nutrition Examination Survey (NHANES) 2017–2020. Three plant-based diet indexes (PDI, healthy PDI, unhealthy PDI) were calculated using data from two NHANES 24-h dietary recall interviews. Restricted Cubic Spline and multivariate logistic regression were used to analyze the associations. Subgroup analysis was adopted to make the results more robust. Results: A total of 5673 eligible participants were analyzed. After adjusting for various confounding variables, uPDI was positively associated with gallstone disease (OR = 1.53, 95%CI: 1.02–2.29). No association was found between PDI/hPDI and gallstone disease (p > 0.05). The results of subgroup analysis did not show any positive association between uPDI and gallstones in specific groups. Conclusion: Our study shows that the elevated uPDI are linked to a higher risk of gallstone disease.

6 August 2022 in Experimental Biology and Medicine
Verified
Journal Article
Closed access
CLChengli Liu
Chengli Liu
MPMeng Pu
Meng Pu
YMYingbo Ma
Yingbo Ma
CWCheng Wang
Cheng Wang
LKLinghong Kong
Linghong Kong
XLXiaopeng Lian
Xiaopeng Lian
Intra-tumor heterogeneity poses a serious challenge in the treatment of cancer, including hepatocellular carcinoma (HCC). Recent developments in single-cell RNA sequencing (scRNA-seq) make it possible to examine the heterogeneity of tumor cells. The Gene Expression Omnibus (GEO) database was retrieved to obtain scRNA-seq data of 13 HCC and 8 para cancer samples, and the cells were clustered using FindNeighbors and FindClusters functions. Cell subsets were defined using the “Enricher” function of the clusterProfiler package. Monocle was used to predict cell developmental trajectory. The LIMMA package included in the R program was utilized to detect differentially expressed genes (DEGs) between HCC and paracancerous tissues. Univariate Cox analysis and Least Absolute and Selection Operator (Lasso) Cox regression analysis were conducted to establish a risk assessment model. Thirteen cell subpopulations were identified from the sequencing data of 64,634 single cells. Four cell subgroups (dendritic cells, hepatocytes, liver bud hepatic cells, and liver progenitor cells) in tumor tissues were highly enriched. Between HCC and para cancer tissues, 3024 DEGs were identified, and 641 were specific markers of four cell subgroups. To develop a prognostic risk model, 9 genes among the 641 genes were selected. In the training and validation sets, the model demonstrated a higher 5-year AUC and independently served as a prognostic marker as confirmed by multivariate and univariate Cox analyses. This study revealed the characteristics of different cell subpopulations of immune cells and tumor cells from the HCC microenvironment. We established a novel nine-gene prognostic model to determine the death risk of HCC patients. The discoveries in this research improved the current knowledge of HCC heterogeneity and may inspire future research.

25 July 2024 in Journal of Cancer Research and Clinical Oncology
Verified
Journal Article
Open access
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SZShuhan Zhang
Shuhan Zhang
LLLuyang Li
Luyang Li
CLChengli Liu
Chengli Liu
MPMeng Pu
Meng Pu
YMYingbo Ma
Yingbo Ma
TXTian Xia
Tian Xia
Background: Currently, there is a lack of effective indicators for predicting the efficacy of immunotherapy in patients with advanced hepatocellular carcinoma (HCC). This study aimed to investigate the expression and prognostic value of peripheral T lymphocyte subsets in advanced HCC. Methods: Patients with advanced HCC who were treated with immune checkpoint inhibitors (ICIs) from December 2021 to December 2023 were included in the study. Flow cytometry was used to detect lymphocyte subsets before treatment. The patients were divided into disease control (DC) and nondisease control (nDC) groups based on treatment efficacy. Relationships between the clinical characteristics/peripheral T lymphocytes and immunotherapy efficacy were analyzed. The effectiveness of peripheral T lymphocyte subsets in predicting immunotherapy efficacy for patients with advanced HCC was analyzed using receiver operating characteristic (ROC) curves. Results: A total of 40 eligible patients were included in this study. Non-DC was significantly associated with higher albumin-bilirubin (ALBI) scores. The percentages of γδ+Vδ2+PD1+ T cells and γδ+Vδ2+Tim3+ T cells were greater in the nDC group than in the DC group. Multivariable regression analysis revealed that the ALBI score and T lymphocytes expressing γδ+Vδ2+PD1+ and γδ+Vδ2+Tim3+ were founded to be independent influencing factors. The area under the ROC curve (AUC) values for these combinations was 0.944 (95% CI, 0.882 ~ 1.000). Conclusions: The calculation of the ALBI score and determination of the percentages CD3+γδ+Vδ2+PD1+ T lymphocytes and CD3+γδ+Vδ2+Tim3+ T lymphocytes in the peripheral blood of patients with advanced HCC are helpful for predicting the patients’ responses to ICIs, helping to screen patients who may clinically benefit from immunotherapy. Retrospectively registered: number: ChiCTR2400080409, date of registration: 2024-01-29.

1 January 2021 in Yonsei Medical Journal
Verified
Journal Article
Open access
PDF file
HZHongyi Zhang
Hongyi Zhang
YXYing Xing
Ying Xing
JLJie Li
Jie Li
CLChengli Liu
Chengli Liu
XHXiao-Jun He
Xiao-Jun He
HZHong-Yi Zhang
Hong-Yi Zhang
Kong YL, et al. Yonsei Med J. 2021 Oct;62(10):918-927. https://doi.org/10.3349/ymj.2021.62.10.918