Soil organic matter depletion is a significant concern in agricultural soils, impacting crucial aspects of ecosystem health, especially soil properties such as fertility and soil moisture retention. Adopting sustainable soil management practices, such as cover crops, can mitigate this issue. In this study, we analyzed the soil organic carbon (SOC) content and quality in vineyards using two distinct management methods: permanent spontaneous cover crops and conventional tillage. Dissolved organic carbon (DOC) was quantified and chemically characterized using UV–visible spectroscopy. Our results showed an increase of 4.7 Mg C/ha in the carbon stock (50 cm depth) after 10 years of implementing vegetation covers compared with tilled soil. Additionally, cover crop management increased less humified soluble carbon in surface soil layers, while tillage transformed the solubilized carbon. This finding is important because tilled soil becomes more accessible to microbial degradation and leaching, which, in the long term, leads to a SOM content decrease. In conclusion, an increase in carbon stock was observed when using cover crops due to the incorporation of fresh organic matter, whereas tilled soils showed a depletion of carbon stock, including the mobilization of more stable carbon.