Hunduma Dinka

Prof. Dr. Hunduma Dinka

Applied Biology, Adama Science and Technology University, Nazrēt, Oromīya, Ethiopia
orcid
Adama Science and Technology University

Research Focus & Metrics

Academic Career Length

9Years (2018-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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11 June 2019 in Malaria Journal
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Journal Article
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TFTemesgen File
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HDHunduma Dinka
Hunduma Dinka
LGLemu Golassa
Lemu Golassa
Malaria is more often considered a problem of the rural poor and the disease has been overlooked in urban settings for centuries due to the assumption that economic development in urban areas results in better life conditions, such as improved housing, drainage system and environmental changes that makes urban areas not conducive for breeding of the malaria vector. But, for many African countries, including Ethiopia, in most urban areas, although there are rapid developments, they are characterized by poor housing, lack of sanitation and drainage of surface water that would provide favourable conditions for vector breeding. Limited studies have been conducted as far as urban malaria is concerned in Ethiopia. The purpose of this study was to assess the status of falciparum and vivax malaria transmission in Adama City, Eastern Shoa Zone, Oromia, Ethiopia. Understanding the local epidemiology of malaria will help policy makers and other stakeholders to design and implement tailored cost effective and efficient intervention strategies targeting urban malaria. The study was designed to analyse 5-year trends of malaria burden by two co-endemic species in Ethiopia (Plasmodium falciparum and Plasmodium vivax) and its annual and seasonal transmission pattern in the city, by using retrospective data on malaria burden by species, malaria related inpatient department (IPD) and outpatient department (OPD) consultations from 2013/14 to 2017/18. OPD retrospective data analysis indicated that adolescents and adults (≥ 15 years of age) were most affected by P. vivax 43.5% (2986/6862) and P. falciparum 31.7% (2179/6862). Plasmodium vivax was found to be a predominant species in causing malaria burden in the city exhibiting less seasonal occurrence, and the relative burden of P. vivax is gradually increasing from year to year over P. falciparum. Malaria is endemic to the city showing a public health problem. The productive group of the community, adolescents and adults, were most affected exacerbating poverty. Plasmodium vivax was found to be the highest malaria burden in the city and the observed epidemiological shift from P. falciparum to P. vivax calls for additional tailored intervention strategies to reduce the associated burden.

1 March 2020 in Heliyon
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Journal Article
Open access
JHJifar Hassen
Jifar Hassen
HDHunduma Dinka
Hunduma Dinka
Malaria is a major health problem in the world particularly in sub-Saharan Africa where 90% of malaria deaths occur. Likewise malaria is one of the leading causes of morbidity and mortality in Ethiopia. It has been reported that about 75% of the country is malarious where 60% of its population is at risk of this infection. Like many African countries, Ethiopian urban settings are characterized by poor housing, lack of sanitation and drainage of surface water which provide conducive environment for the breeding of vector mosquitoes for the transmission of malaria. There are few researches on urban malaria under the urban settings of Ethiopia. The purpose of this study was to assess the magnitude of malaria cases due to Plasmodium falciparum and Plasmodium vivax in Batu town, Oromia, Ethiopia. Retrospective laboratory confirmed malaria case record data of six years (2012-2017) were used to analyze the magnitude of malaria cases due to P. falciparum and P. vivax, in Batu town, Oromia, Ethiopia. The retrospective data analysis revealed an overall 21,797 malaria confirmed cases; of which 49.5% were due to P. falciparum and 50.5% were due to P. vivax, with a slight decline in malaria between 2012 and 2017. Malaria cases were recorded in both sexes and all age groups in the study area. From the result of the present analysis it can be concluded that both P. falciparum and P. vivax were the cause for malaria cases indicating malaria is still public health problem in Batu town. Therefore, appropriate strategic control measures must be designed to protect the public and eventually eliminate malaria from the area and the country as a whole.

10 August 2022 in BMC Genomic Data
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BSBehailu Samuel
Behailu Samuel
DMDejenie Mengistie
Dejenie Mengistie
EAErmias Assefa
Ermias Assefa
MKMingue Kang
Mingue Kang
CPChankyu Park
Chankyu Park
HDHunduma Dinka
Hunduma Dinka
Background: Diacylglycerol acyl-CoA acyltransferase 1 (DGAT1) has become a promising candidate gene for milk production traits because of its important role as a key enzyme in catalyzing the final step of triglyceride synthesis. Thus use of bovine DGAT1 gene as milk production markers in cattle is well established. However, there is no report on polymorphism of the DGAT1 gene in Ethiopian cattle breeds. The present study is the first comprehensive report on diversity, evolution, neutrality evaluation and genetic differentiation of DGAT1 gene in Ethiopian cattle population. The aim of this study was to characterize the genetic variability of exon 8 region of DGAT1 gene in Ethiopian cattle breeds. Results: Analysis of the level of genetic variability at the population and sequence levels with genetic distance in the breeds considered revealed that studied breeds had 11, 0.615 and 0.010 haplotypes, haplotype diversity and nucleotide diversity respectively. Boran-Holstein showed low minor allele frequency and heterozygosity, while Horro showed low nucleotide and haplotype diversities. The studied cattle DGAT1 genes were under purifying selection. The neutrality test statistics in most populations were negative and statistically non-significant (p > 0.10) and consistent with a populations in genetic equilibrium or in expansion. Analysis for heterozygosity, polymorphic information content and inbreeding coefficient revealed sufficient genetic variation in DGAT1 gene. The pairwise FST values indicated significant differentiation among all the breeds (FST = 0.13; p ≤ 0.05), besides the rooting from the evolutionary or domestication history of the cattle inferred from the phylogenetic tree based on the neighbourhood joining method. There was four separated cluster among the studied cattle breeds, and they shared a common node from the constructed tree. Conclusion: The cattle populations studied were polymorphic for DGAT1 locus. The DGAT1 gene locus is extremely crucial and may provide baseline information for in-depth understanding, exploitation of milk gene variation and could be used as a marker in selection programmes to enhance the production potential and to accelerate the rate of genetic gain in Ethiopian cattle populations exposed to different agro ecology condition.

8 March 2022 in Journal of International Medical Research
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Journal Article
Open access
JHJifar Hassen
Jifar Hassen
HDHunduma Dinka
Hunduma Dinka
Objective: This study aimed to assess the magnitude of malaria and its associated risk factors in urban, Batu town, Oromia Regional State, Ethiopia. Methods: This health-facility based prospective cross-sectional study enrolled 356 febrile malaria patients to assess risk factors associated with malaria infection. Results: An overall positivity rate of 17.13% (61/356) for malaria infection was observed. Among the malaria-positive patients, 50.8% (31/61) of them were positive for Plasmodium vivax, 45.90% (28/61) were positive for Plasmodium falciparum, and 3.3% (2/61) had mixed infections of P. falciparum and P. vivax. Logistic regression analysis revealed that individuals who possessed insecticide-treated net (Odds ratio [OR] = 0.38, 95% confidence interval [CI] [0.194, 0.743]) and whose houses were sprayed with insecticides (OR = 0.18, 95% CI [0.097, 0.34]) were significantly less likely to have a malaria infection. Individuals living closer to stagnant water had a significantly greater chance of malaria infection than those who lived a distance from stagnant water (OR = 0.34, 95% CI [0.19, 0.59]). Conclusion: The present study revealed that malaria remains a public health problem in the urban area of Batu town, which suggests that the same might be true for other urban areas in the country.

6 February 2020 in Nucleosides, Nucleotides & Nucleic Acids
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Journal Article
Closed access
BSBehailu Samuel
Behailu Samuel
HDHunduma Dinka
Hunduma Dinka
Identifications of transcription start sites (TSSs) and promoter regions are first step to understand the regulation mechanisms of gene expression and association with genetic variations in the regions. This analysis was conducted with the objectives to identify TSSs, determine the promoter regions, identify common candidate motifs and transcription factors (TFs), and search for CpG islands (CGIs) in cattle olfactory receptors (ORs) genes promoter regions. In the analysis, TSSs of cattle olfactory genes were first identified. The locations for 60% of the TSSs were below –500 bp relative to the start codon and five candidate motifs (MOR1, MOR2, MOR3, MOR4, and MOR5) were identified that are shared by at least 50% of the cattle ORs promoter input sequences from both strands. Among the five candidate motifs, MOR4 was revealed as the common promoter motif for 85.71% of cattle ORs genes that serves as binding sites for TFs involved in the expression regulation of these genes. MOR4 was also compared to registered motifs in publically available databases to see if they are similar to known regulatory motifs for TF by using the TOMTOM web application. Hence, it was revealed that MOR4 may serve as the binding site mainly for the Zinc finger (ZNF) TF gene family to regulate expression of cattle ORs genes. Further gene ontology analysis for MOR4 demonstrated ORs belong to the G-protein-coupled receptor superfamily and MOR4 tend to be located near the genes involved in the detection of chemical stimulus involved in sensory perception and in innate immune responses such as cytokine-mediated signaling. In silico digestion of cattle OR sequences was performed using restriction enzyme MspI. CGIs from OR10K1 and OR2L13 gene was found. In the present analysis, the poor CGIs observed might suggest their gene expression regulation pattern is in tissue specific manner.

1 January 2024 in International Journal of Microbiology
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Journal Article
Open access
OUOlyad Erba Urgessa
Olyad Erba Urgessa
RKRufael Koyamo
Rufael Koyamo
HDHunduma Dinka
Hunduma Dinka
KTKetema Tafess Tulu
Ketema Tafess Tulu
AGAbu Tafesse Gemeda
Abu Tafesse Gemeda
Poultry’s digestive tract lacks hydrolytic phytase enzymes, which results in chelation of dietary minerals, vital amino acids, proteins, and carbohydrates, phytate‐phosphate unavailability, and contamination of the environment due to phosphorus. Therefore, it is necessary to use exogenous microbial phytases as feed additive to chicken feed to catalyze the hydrolysis of dietary phytate. Potential sources of microbial isolates that produce desired phytases for chicken feed supplementation have been isolated from agricultural croplands. It is achievable to isolate phytase‐producing bacteria isolates using both broth and agar phytase screening media. Potential substrates for submerged fermentation (SmF) for bacterial phytase production and solid‐state fermentation (SSF) for fungal phytase production include rice and wheat bran. Following fermentation, saturated ammonium sulphate precipitation is typically used to partially purify microbial culture filtrate. The precipitate is then desalted. Measurements of the pH optimum and stability, temperature optimum and stability, metal ions stability, specificity and affinity to target substrate, proteolysis resistance, storage stability, and in vitro feed dephosphorylation are used to perform an enzymatic evaluation of phytase as an additive for poultry feed. The growth of the feed phytase market is primarily due to the expansion of chicken farms to meet the demand for meat and eggs from humans. The Food and Drug Administration in the USA and the European Food and Safety Authority are primarily in charge of putting rules pertaining to feed phytase use in chicken feed into effect. Conclusively, important components of the production of phytase additives for poultry feed include identifying a reliable source for potential microbe isolation, selecting an economical method of phytase production, thoroughly characterizing the biochemical properties of phytase, and comprehending the size and regulation of the current feed phytase market.