Mateusz Czub

Dr. Mateusz Czub


Research Focus & Metrics

Academic Career Length

12Years (2015-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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17 June 2020 in Journal of Medicinal Chemistry
Verified
Journal Article
Closed access
MCMateusz Czub
Mateusz Czub
KHKatarzyna B. Handing
Katarzyna B. Handing
BVBarat S. Venkataramany
Barat S. Venkataramany
DCDavid R. Cooper
David R. Cooper
ISIvan Shabalin
Ivan Shabalin
WMWladek Minor
Wladek Minor

17 December 2018 in Chemical Science
Verified
Journal Article
Open access
PDF file
MCMateusz Czub
Mateusz Czub
BVBarat S. Venkataramany
Barat S. Venkataramany
KMKarolina A. Majorek
Karolina A. Majorek
KHKatarzyna B. Handing
Katarzyna B. Handing
PPPrzemyslaw J. Porebski
Przemyslaw J. Porebski
WMWladek Minor
Wladek Minor
The first albumin structure in complex with testosterone and the hormone's binding affinity measured with two methods.

1 January 2015 in International Journal of Biological Macromolecules
Verified
Journal Article
Closed access
JLJoanna Loch
Joanna Loch
PBPiotr Bonarek
Piotr Bonarek
APAgnieszka Polit
Agnieszka Polit
SŚSylwia Świątek
Sylwia Świątek
MCMateusz Czub
Mateusz Czub
KLKrzysztof Lewiński
Krzysztof Lewiński

16 July 2022 in IUCrJ
Verified
Journal Article
Open access
PDF file
MCMateusz Czub
Mateusz Czub
Alan J. StewartAlan J. Stewart
Alan J. Stewart
ISIvan Shabalin
Ivan Shabalin
WMWladek Minor
Wladek Minor
Serum albumin is a circulatory transport protein that has a highly conserved sequence and structure across mammalian organisms. Its ligand-binding properties are of importance as albumin regulates the pharmacokinetics of many drugs. Due to the high degree of structural conservation between mammalian albumins, nonhuman albumins such as bovine serum albumin or animal models are often used to understand human albumin–drug interactions. Ketoprofen is a popular nonsteroidal anti-inflammatory drug that is transported by albumin. Here, it is revealed that ketoprofen exhibits different binding-site preferences when interacting with human serum albumin compared with other mammalian albumins, despite the conservation of binding sites across species. The reasons for the observed differences were explored, including identifying ketoprofen binding determinants at specific sites and the influence of fatty acids and other ligands on drug binding. The presented results reveal that the drug-binding properties of albumins cannot easily be predicted based only on a complex of albumin from another organism and the conservation of drug sites between species. This work shows that understanding organism-dependent differences is essential for assessing the suitability of particular albumins for structural or biochemical studies.

30 November 2018 in Biochemistry
Verified
Journal Article
Open access
MCMateusz Czub
Mateusz Czub
BZBrian Zhang
Brian Zhang
MCM. Paul Chiarelli
M. Paul Chiarelli
KMKarolina A. Majorek
Karolina A. Majorek
LJLayton Joe
Layton Joe
MKMisty L Kuhn
Misty L Kuhn
Deeper exploration of uncharacterized Gcn5-related N-acetyltransferases has the potential to expand our knowledge of the types of molecules that can be acylated by this important superfamily of enzymes and may offer new opportunities for biotechnological applications. While determining native or biologically relevant in vivo functions of uncharacterized proteins is ideal, their alternative or promiscuous in vitro capabilities provide insight into key active site interactions. Additionally, this knowledge can be exploited to selectively modify complex molecules and reduce byproducts when synthetic routes become challenging. During our exploration of uncharacterized Gcn5-related N-acetyltransferases from Pseudomonas aeruginosa, we identified such an example. We found that the PA3944 enzyme acetylates both polymyxin B and colistin on a single diaminobutyric acid residue closest to the macrocyclic ring of the antimicrobial peptide and determined the PA3944 crystal structure. This finding is important for several reasons: 1) to our knowledge this is the first report of enzymatic acylation of polymyxins and thus reveals a new type of substrate that this enzyme family can use, 2) the enzymatic acetylation offers a controlled method for antibiotic modification compared to classical promiscuous chemical methods, and 3) the site of acetylation would reduce the overall positive charge of the molecule, which is important for reducing nephrotoxic effects and may be a salvage strategy for this important class of antibiotics. While the physiological substrate for this enzyme remains unknown, our structural and functional characterization of PA3944 offers insight into its unique non-canonical substrate specificity.

1 September 2015 in International Journal of Biological Macromolecules
Verified
Journal Article
Closed access
JLJoanna Loch
Joanna Loch
PBPiotr Bonarek
Piotr Bonarek
APAgnieszka Polit
Agnieszka Polit
MJMateusz Jabłoński
Mateusz Jabłoński
MCMateusz Czub
Mateusz Czub
KLKrzysztof Lewiński
Krzysztof Lewiński