Serkan Bakirci

Prof. Dr. Serkan Bakirci


Research Focus & Metrics

Academic Career Length

12Years (2015-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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27 April 2017 in Parasites & Vectors
Verified
Journal Article
Open access
PDF file
HBHuseyin Bilgin Bilgic
Huseyin Bilgin Bilgic
SBSerkan Bakirci
Serkan Bakirci
OKOnur Kose
Onur Kose
AUAhmet Hakan Unlu
Ahmet Hakan Unlu
SHSelin Hacılarlıoglu
Selin Hacılarlıoglu
TKTulin Karagenc
Tulin Karagenc
Tick-borne haemoparasitic diseases (TBHDs), caused by Theileria, Babesia, Anaplasma and Ehrlichia, are common in regions of the world where the distributions of host, pathogen and vector overlap. Many of these diseases threaten livestock production and some also represent a concern to human public health. The primary aim of this study was to determine the prevalence of the above-mentioned pathogens in a large number of blood samples (n = 1979) collected from sheep (n = 1727) and goats (n = 252) in Turkey. A secondary aim was to assess the diagnostic sensitivity of a number of species-specific polymerase chain reaction (PCR) tests and the reverse line blotting (RLB) assay. DNA samples were screened using species-specific PCR for the presence of Theileria ovis, Theileria sp. MK, T. lestoquardi, T. uilenbergi, T. luwenshuni, Babesia ovis, Anaplasma ovis and A. phagocytophilum while RLB was undertaken to test for the presence of all known Theileria, Babesia, Anaplasma and Ehrlichia species. The diagnostic sensitivity of these two approaches was then compared in terms of their ability to detect single species and mixed infections. Overall, 84 and 74.43% of the small ruminants sampled were identified as hosting one or more pathogen(s) by species-specific PCR and RLB respectively. The presence of Theileria sp. OT1, T. luwenshuni and T. uilenbergi in Turkey was revealed for the first time while the presence of Babesia motasi, B. crassa and T. separata in Turkish small ruminants was confirmed using molecular methods. A high prevalence of mixed infection was evident, with PCR and RLB approaches indicating that 52.24 and 35.42% of animals were co-infected with multiple species, respectively. More than 80% of the mixed infections contained T. ovis and/or A. ovis. The RLB approach was found to be capable of detecting mixed infections with species such as Theileria sp. OT1, Theileria sp. OT3, T. separata, B. crassa and Babesia spp. The results indicated that pathogens causing TBHDs are highly prevalent in sheep and goats in Turkey. The diagnostic sensitivity of species-specific single PCR was generally higher than that of RLB. However, the latter approach was still capable of identifying a high proportion of individuals containing mixed-species infections. The use of species-specific single PCR is recommended to accurately estimate pathogen prevalence and to identify co-infected hosts.

5 June 2017 in BMC Genomics
Verified
Journal Article
Open access
PDF file
LLLaetitia Lempereur
Laetitia Lempereur
SLStephen D. Larcombe
Stephen D. Larcombe
ZDZeeshan Durrani
Zeeshan Durrani
TKTulin Karagenc
Tulin Karagenc
HBHuseyin Bilgin Bilgic
Huseyin Bilgin Bilgic
BSBrian Shiels
Brian Shiels
Vector-borne apicomplexan parasites are a major cause of mortality and morbidity to humans and livestock globally. The most important disease syndromes caused by these parasites are malaria, babesiosis and theileriosis. Strategies for control often target parasite stages in the mammalian host that cause disease, but this can result in reservoir infections that promote pathogen transmission and generate economic loss. Optimal control strategies should protect against clinical disease, block transmission and be applicable across related genera of parasites. We have used bioinformatics and transcriptomics to screen for transmission-blocking candidate antigens in the tick-borne apicomplexan parasite, Theileria annulata. A number of candidate antigen genes were identified which encoded amino acid domains that are conserved across vector-borne Apicomplexa (Babesia, Plasmodium and Theileria), including the Pfs48/45 6-cys domain and a novel cysteine-rich domain. Expression profiling confirmed that selected candidate genes are expressed by life cycle stages within infected ticks. Additionally, putative B cell epitopes were identified in the T. annulata gene sequences encoding the 6-cys and cysteine rich domains, in a gene encoding a putative papain-family cysteine peptidase, with similarity to the Plasmodium SERA family, and the gene encoding the T. annulata major merozoite/piroplasm surface antigen, Tams1. Candidate genes were identified that encode proteins with similarity to known transmission blocking candidates in related parasites, while one is a novel candidate conserved across vector-borne apicomplexans and has a potential role in the sexual phase of the life cycle. The results indicate that a ‘One Health’ approach could be utilised to develop a transmission-blocking strategy effective against vector-borne apicomplexan parasites of animals and humans.

1 March 2019 in Turkish Journal of Parasitology
Verified
Journal Article
Closed access
SBSerkan Bakirci
Serkan Bakirci
NANuran Aysul
Nuran Aysul
HBHüseyin Bilgin Bilgiç
Hüseyin Bilgin Bilgiç
SHSelin Hacılarlıoğlu
Selin Hacılarlıoğlu
HEHasan Eren
Hasan Eren
TKTülin Karagenc
Tülin Karagenc
The aim of the present study was to determine tick species found on humans who suffered from tick bite in the Southwestern Anatolia Region, Turkey. Between January and October 2007, ticks were collected from people admitted to the city and/or town hospitals with complaints of tick bites in nine different provinces of Turkey. Genus and/or species of the ticks in adult, larva and nymph stages were identified microscopically. Identification was done using related taxonomic keys. A total of 2.610 ticks were collected from humans who were admitted to the hospitals with complaints of tick bites in the Southwestern Anatolia Region in the present study. Of these, 1.858 samples were collected from the Aegean Region and the remaining 752 from the Mediterranean Region of the country. The ticks were identified as Hyalomma spp. (78.58%), Rhipicehalus spp. (18.89%), Ixodes spp. (0.88%), Dermacentor spp. (0.77%), Haemaphysalis spp. (0.61%), Argas spp. (0.23%), and Ornithodoros spp. (0.04%). Results indicated that the majority of the ticks were nymphs of Hyalomma spp. (n=1.582). Nymphal stage was most commonly encountered from the Aegean Region and the Mediterranean Region with a prevalence of 46.13% (n=1.204) and 14.48% (n=378) respectively. Within the collected adult ticks (n=913), the majority of the samples were identified as H. marginatum (n=233, 26.09%). The results indicate the high diversity of tick species infesting humans in the Southwestern Anatolia Region, Turkey. So, it is crucial to publish information on tick bite prevention, which would play an important role in reducing the incidence of tick-borne diseases.

1 January 2016 in TURKISH JOURNAL OF VETERINARY AND ANIMAL SCIENCES
Verified
Journal Article
Open access
SBSerkan Bakirci
Serkan Bakirci
HBHüseyin Bilgin Bi̇lGi̇ç
Hüseyin Bilgin Bi̇lGi̇ç
OKOnur Köse
Onur Köse
AAAyca Aksulu
Ayca Aksulu
SHSelin Hacılarlıoğlu
Selin Hacılarlıoğlu
TKTülin Karagenc
Tülin Karagenc

15 January 2022 in Acta Parasitologica
Verified
Journal Article
Closed access
PDF file
OKOnur Kose
Onur Kose
HBHuseyin Bilgin Bilgic
Huseyin Bilgin Bilgic
SBSerkan Bakirci
Serkan Bakirci
TKTülin Karagenc
Tülin Karagenc
RARamazan Adanir
Ramazan Adanir
HEHasan Eren
Hasan Eren

1 January 2020 in Ticks and Tick-borne Diseases
Verified
Journal Article
Closed access
HBHuseyin Bilgin Bilgic
Huseyin Bilgin Bilgic
SHSelin Hacilarlioglu
Selin Hacilarlioglu
SBSerkan Bakirci
Serkan Bakirci
OKOnur Kose
Onur Kose
AUAhmet Hakan Unlu
Ahmet Hakan Unlu
TKTulin Karagenc
Tulin Karagenc