In small systems where relevant energies are comparable to thermal agitation, fluctuations are of the order of average values. In systems in thermodynamical equilibrium, the variance of these fluctuations can be related to the dissipation constant in the system, exploiting the fluctuation-dissipation theorem. In nonequilibrium steady systems, fluctuations theorems (FT) additionally describe symmetry properties of the probability density functions (PDFs) of the fluctuations of injected and dissipated energies. We experimentally probe a model system: an electrical dipole driven out of equilibrium by a small constant current , and show that FT are experimentally accessible and valid. Furthermore, we stress that FT can be used to measure the dissipated power in the system by just studying the PDFs’ symmetries.
For generic systems exhibiting power law behaviors, and hence multiscale dependencies, we propose a simple tool to analyze multifractality and intermittency, after noticing that these concepts are directly related to the deformation of a probability density function from Gaussian at large scales to non-Gaussian at smaller scales. Our framework is based on information theory and uses Shannon entropy and Kullback-Leibler divergence. We provide an extensive application to three-dimensional fully developed turbulence, seen here as a paradigmatic complex system where intermittency was historically defined and the concepts of scale invariance and multifractality were extensively studied and benchmarked. We compute our quantity on experimental Eulerian velocity measurements, as well as on synthetic processes and phenomenological models of fluid turbulence. Our approach is very general and does not require any underlying model of the system, although it can probe the relevance of such a model.
Among the different indicators that quantify the spread of an epidemic such as the on-going COVID-19, stands first the reproduction number which measures how many people can be contaminated by an infected person. In order to permit the monitoring of the evolution of this number, a new estimation procedure is proposed here, assuming a well-accepted model for current incidence data, based on past observations. The novelty of the proposed approach is twofold: 1) the estimation of the reproduction number is achieved by convex optimization within a proximal-based inverse problem formulation, with constraints aimed at promoting piecewise smoothness; 2) the approach is developed in a multivariate setting, allowing for the simultaneous handling of multiple time series attached to different geographical regions, together with a spatial (graph-based) regularization of their evolutions in time. The effectiveness of the approach is first supported by simulations, and two main applications to real COVID-19 data are then discussed. The first one refers to the comparative evolution of the reproduction number for a number of countries, while the second one focuses on French departments and their joint analysis, leading to dynamic maps revealing the temporal co-evolution of their reproduction numbers.
1 September 2021 in Current Opinion in Systems Biology
We here present the complete analysis of experiments on driven Brownian motion and electric noise in an RC circuit, showing that thermodynamic entropy production can be related to the breaking of time-reversal symmetry in the statistical description of these non-equilibrium systems. The symmetry breaking can be expressed in terms of dynamical entropies per unit time, one for the forward process and the other for the time-reversed process. These entropies per unit time characterize dynamical randomness, i.e., temporal disorder, in time series of the non-equilibrium fluctuations. Their difference gives the well-known thermodynamic entropy production, which thus finds its origin in the time asymmetry of dynamical randomness, alias temporal disorder, in systems driven out of equilibrium.
Acoustical signal transduction in the cochlea is an active process that involves nonlinear amplification and spontaneous otoacoustic emissions. Signal transduction involves individual subunits composed of globally coupled hair cells, which can be modeled as oscillators close to a Hopf bifurcation. The coupling may induce a transition toward synchronization, which in turn leads to a strong nonlinear response. In the model studied here, the synchronization transition of the subunit is discontinuous (explosive) in the absence of an external stimulus. We show that, in the presence of an external stimulus and for a coupling strength slightly lower than the critical value leading to explosive synchronization, the response of the subunit has better frequency selectivity and a larger signal-to-noise ratio. From physiological observations that subunits are themselves coupled together, we further propose a model of the complete cochlea, accounting for the ensemble of frequencies that the organ is able to detect.