Xiaobiao Xu

Dr. Xiaobiao Xu

orcid

Research Focus & Metrics

Academic Career Length

4Years (2023-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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21 August 2024 in Scientific Reports
Verified
Journal Article
Open access
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JMJipeng Mao
Jipeng Mao
ZGZhu Gao
Zhu Gao
XXXiaobiao Xu
Xiaobiao Xu
DYDongliang Yao
Dongliang Yao
MLMengfei Lin
Mengfei Lin
LCLu Chen
Lu Chen
So far, a variety of metabolite components of kiwifruit have been elucidated. However, the identification and analysis of flavonoids in different tissues of kiwifruit are rarely carried out. In this study, we performed transcriptome and metabolome analyses of roots (Gkf_R), stems (Gkf_T), leaves (Gkf_L), and fruits (Gkf_F) to provide insights into the differential accumulation and regulation mechanisms of flavonoids in kiwifruit. Results showed that a total of 301 flavonoids were identified, in four tissues with different accumulation trends, and a large proportion of flavonoids had high accumulation in Gkf_L and Gkf_R. A total of 84 genes have been identified involved in the flavonoid biosynthesis pathway, and the expression levels of five LAR, two DFR, and one HCT were significantly correlated with the accumulation of 16 flavonoids and co-localized in the flavonoid biosynthesis pathway. In addition, a total of 2362 transcription factor genes were identified, mainly MYBs, bHLHs, ERFs, bZIPs and WRKYs, among which the expression level of bHLH74, RAP2.3L/4L/10L, MYB1R1, and WRKY33 were significantly correlated with 25, 56, 43, and 24 kinds of flavonoids. Our research will enrich the metabolomic data and provide useful information for the directed genetic improvement and application in the pharmaceutical industry of kiwifruit.

28 November 2023 in International Journal of Biological Macromolecules
Verified
Journal Article
Closed access
MLMengfei Lin
Mengfei Lin
ZGZhu Gao
Zhu Gao
XXXiaobiao Xu
Xiaobiao Xu
HHHeqiang Huo
Heqiang Huo
JMJipeng Mao
Jipeng Mao
YCYunpeng Cao
Yunpeng Cao

2 April 2025 in BMC Plant Biology
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Journal Article
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XGXuchen Gong
Xuchen Gong
MLMengfei Lin
Mengfei Lin
JSJie Song
Jie Song
JMJipeng Mao
Jipeng Mao
DYDongliang Yao
Dongliang Yao
XXXiaobiao Xu
Xiaobiao Xu
After analyzing a high-quality ‘Hongyang’ genome, we identified 17 AcBAMs. Comprehensive bioinformatics were performed to elucidate the properties and evolutionary relationships of these genes. Our analysis revealed that most AcBAMs retained conserved active sites (e.g., Glu186 and Glu380) and exhibited similar structural properties. Phylogenetic and collinearity analyses grouped the genes into three main clusters, with segmental and tandem duplications contributing to their expansion. Expression profiling showed that AcBAM5 and AcBAM13 were most highly expressed during postharvest storage and were strongly induced by ABA signal. Silencing these genes led to a significant increase in starch content, suggesting their key role in starch degradation. Promoter analysis identified cis-elements related to ABA signal and cold response in the AcBAM family, and the expression of AcBAM genes was influenced by ABA and low-temperature treatments, with specific genes showing significant responsiveness. Background Kiwifruit (Actinidia chinensis cv. Hongyang) is a perennial woody fruit tree highly valued for its rich nutritional profile and high vitamin C content. The postharvest ripening process, characterized by starch degradation into soluble sugars, significantly influences the fruit's flavor and texture. β-amylase (BAM) has been proven to be one of the key enzymes catalyzing starch degradation, but which BAM genes are involved and how to participate in this process in kiwifruit still need to be clarified. Conclusion In the study, we identified a total of 17 AcBAM genes. The expansion of AcBAMs in kiwifruit was mainly due to segmental duplication events, and some of their catalytic residues were mutated, potentially leading to a loss of biological activity. The expression patterns of AcBAMs, along with VIGS data, suggest that AcBAM5 and AcBAM13 respond to ABA signals and promote starch degradation. Our findings provide valuable insights into the regulatory mechanisms of BAM genes in kiwifruit and highlight their importance in starch metabolism and fruit ripening.

5 August 2025 in Foods
Verified
Journal Article
Open access
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JXJiang Xinfeng
Jiang Xinfeng
XLXin Lei
Xin Lei
CLChen Li
Chen Li
LWLixian Wang
Lixian Wang
XXXiaobiao Xu
Xiaobiao Xu
HJHeyuan Jiang
Heyuan Jiang
Black tea is widely consumed worldwide, and its characteristic taste and color result from fermentation, where polyphenols are enzymatically oxidized to generate major pigments, including theaflavins (TFs), thearubigins (TRs), and theabrownins (TBs). This study investigated the effects of increased oxygen treatment during fermentation on the flavor attributes and chemical properties of Congou black tea. Fresh tea leaves (variety “Fuyun 6”) were subjected to four oxygen treatments: 0 h (CK), 1 h (TY-1h), 2 h (TY-2h), and 3 h (TY-3h), with oxygen supplied at 8.0 L/min. Sensory evaluation revealed that oxygen-treated samples exhibited tighter and deeper-colored leaves, a redder liquor, fuller taste, and a sweeter fragrance compared with CK. Chromatic analysis showed significant increases in redness (a*) and luminance (L*), alongside reduced yellowness (b*), indicating enhanced liquor color. Chemical analyses demonstrated elevated levels of TFs, TRs, and TBs in oxygen treatments, with TRs showing the most pronounced increase. Non-targeted metabolomics identified 2318 non-volatile and 761 volatile metabolites, highlighting upregulated flavonoids, phenolic acids, and lipids, and downregulated catechins and tannins, which collectively contributed to improved taste and aroma. Optimal results were achieved with 2–3 h of oxygen treatment, balancing pigment formation and sensory quality. These findings can provide a scientific basis for optimizing oxygen conditions in black tea fermentation to improve product quality.

1 August 2024 in Plant Disease
Verified
Journal Article
Closed access
LPLiuyi Pan
Liuyi Pan
ZGZhu Gao
Zhu Gao
JMJipeng Mao
Jipeng Mao
MLMengfei Lin
Mengfei Lin
XZXiaoli Zhang
Xiaoli Zhang
QCQinghong Chen
Qinghong Chen
Kiwifruits (Actinidia chinensis) are among the most widely planted fruit in Jiangxi Province, China. Infected kiwifruits of the cultivars 'Hongyang' and 'Jinyan' were obtained from a commercial orchard in Fengxin county, Jiangxi Province (28°67' N; 115°42' E) from September to November 2022. The 1200 kiwifruits were collected from cold storage (cold stored for 3 months at 2°C), and moved to room temperatures (15 to 20°C), approximately 20% had symptoms of postharvest soft rot 7 days later. The infected fruits had brown or dark gray spots on the peel. Most were round or oval, with a diameter of approximately 1~3 cm. The pulp was milky white, and there was a waterlogged ring at the junction of decay. The pathogen was isolated by removing several small pieces (3×3 mm) of infected tissue from the diseased kiwifruits, which were sterilized with 75% ethanol for 30 s, dipped in 1% NaClO for 1 min, and rinsed three times with sterile distilled water. These pieces were transferred onto potato dextrose agar (PDA) and incubated for 5 days at 28°C, 75% relative humidity (RH), separated, and repurified. Eight unidentified isolates with similar morphology were obtained on PDA (D3-1 to D3-8). These isolates had abundant aerial fluffy mycelia. The colonies were white during the early stage of culture and turned light purple in the later stage. The mycelia grew 5.8 mm day-1 (n=5) on average and produced abundant conidia 10 days later. The microconidia were solitary, transparent, ovoid, with 0 to 1 septa, and 3.6 to 11.2 × 1.6 to 3.5 µm (average 6.5 × 2.9 µm, n = 50). The macroconidia were sickle-shaped, slender and slightly curved, with 3 to 5 septa, and 22.3 to 53.9 × 2.6 to 5.4 µm (average 39.5 × 4.3 µm, n = 50). Chlamydospores were absent. The morphological characteristics enabled the identification of the pathogen as Fusarium spp. (Leslie and Summerell, 2006). Isolate D3-2 was further confirmed, and the primers ITS1/ITS4 (White et al. 1990), 5F2/7CR and EF1/EF2 (O'Donnell et al. 2022) were used to amplify the internal transcribed spacer (ITS) region, RNA polymerase II largest subunit (RPB2) gene and translation elongation factor-1 alpha regions (TEF-1α). The ITS (accession no. PP077075), RPB2 (PP566653) and TEF-1α (PP566654) sequences shared 99.62 to 100% identities with ITS (ON564593.1), RPB2 (ON734380.1) and TEF-1α (ON697186.1) of F. fujikuroi from NCBI, respectively. Thus, the pathogen was identified as F. fujikuroi based on morphological and molecular characteristics. Each of the three isolates was inoculated on surface-disinfected (75% ethanol, 5 min) disease-free kiwifruits of cv. 'Jinyan' and 'Hongyang'. The six kiwifruits were pierced by a sterile inoculation needle and inoculated with 20 μl spore suspension (1×106 spores/ml), and six kiwifruits were treated with spore suspension without any wounds, four control fruits were inoculated with sterile distilled water. All the fruits were sealed in a storage box, kept at an RH of 90%-95%, and incubated at a constant temperature of 28°C for 5 days. After 3 days, the fruit rotted at the inoculation site, and after 5 days, the lesions gradually increased, and the symptoms were the same as those of the original sample. The control fruits remained disease-free. The pathogenicity tests were repeated three times. Koch's postulates were completed by reisolating the fungus from infected kiwifruits, which was identified as F. fujikuroi by sequencing. Although F. solani (Yang et al. 2018) and F. acuminatum (Wang et al. 2015) have been previously reported to rot kiwifruits in China, this is the first report of F. fujikuroi causing postharvest rot on kiwifruits in China. This discovery can alert agronomists to prevent and control this pathogen.

26 June 2025 in Preprints.org
Verified
Preprint
Open access
PDF file
JXJiang Xinfeng
Jiang Xinfeng
XLXin Lei
Xin Lei
CLChen Li
Chen Li
LWLixian Wang
Lixian Wang
XXXiaobiao Xu
Xiaobiao Xu
HJHeyuan Jiang
Heyuan Jiang
Black tea is a globally popular beverage, whose unique flavor and color are attributed to the fer-mentation process, during which polyphenols undergo enzymatic oxidation to form key pigments such as theaflavins (TFs), thearubigins (TRs), and theabrownins (TBs). This study investigated the effects of increased oxygen treatment during fermentation on the sensory and chemical qualities of Congou black tea. Fresh tea leaves (variety "Fuyun 6") were subjected to four oxygen treatments: 0 h (CK), 1 h (TY-1h), 2 h (TY-2h), and 3 h (TY-3h), with oxygen supplied at 8.0 L/min. Sensory evaluation revealed that oxygen-treated samples exhibited tighter and darker appearances, redder liquor, thicker taste, and sweeter aroma compared to CK. Chromatic analysis showed significant increases in redness (a*) and luminance (L*), alongside reduced yellowness (b*), indicating en-hanced liquor color. Chemical analyses demonstrated elevated levels of TFs, TRs, and TBs in oxygen treatments, with TRs showing the most pronounced increase. Non-targeted metabolomics identified 2318 non-volatile and 761 volatile metabolites, highlighting upregulated flavonoids, phenolic acids, and lipids, and downregulated catechins and tannins, which collectively contributed to improved taste and aroma. Optimal results were achieved with 2–3 h of oxygen treatment, balancing pigment formation and sensory quality. These findings can provide a scientific basis for optimizing oxygen conditions in black tea fermentation to improve product quality.