Phenotypic analysis of mature soybeans is a critical aspect of soybean breeding. However, manually obtaining phenotypic parameters not only is time-consuming and labor intensive but also lacks objectivity. Therefore, there is an urgent need for a rapid, accurate, and efficient method to collect the phenotypic parameters of soybeans. This study develops a novel pipeline for acquiring the phenotypic traits of mature soybeans based on three-dimensional (3D) point clouds. First, soybean point clouds are obtained using a multi-view stereo 3D reconstruction method, followed by preprocessing to construct a dataset. Second, a deep learning-based network, PVSegNet (Point Voxel Segmentation Network), is proposed specifically for segmenting soybean pods and stems. This network enhances feature extraction capabilities through the integration of point cloud and voxel convolution, as well as an orientation-encoding (OE) module. Finally, phenotypic parameters such as stem diameter, pod length, and pod width are extracted and validated against manual measurements. Experimental results demonstrate that the average Intersection over Union (IoU) for semantic segmentation is 92.10%, with a precision of 96.38%, recall of 95.41%, and F1-score of 95.87%. For instance segmentation, the network achieves an average precision (AP@50) of 83.47% and an average recall (AR@50) of 87.07%. These results indicate the feasibility of the network for the instance segmentation of pods and stems. In the extraction of plant parameters, the predicted values of pod width, pod length, and stem diameter obtained through the phenotypic extraction method exhibit coefficients of determination ($R^2$) of 0.9489, 0.9182, and 0.9209, respectively, with manual measurements. This demonstrates that our method can significantly improve efficiency and accuracy, contributing to the application of automated 3D point cloud analysis technology in soybean breeding.

The accurate and rapid identification of rice diseases is crucial for enhancing rice yields. However, this task encounters several challenges: (1) Complex background problem: The rice background in a natural environment is complex, which interferes with rice disease recognition; (2) Disease region irregularity problem: Some rice diseases exhibit irregular shapes, and their target regions are small, making them difficult to detect; (3) Classification and localization problem: Rice disease recognition employs identical features for both classification and localization tasks, thereby affecting the training effect. To address the aforementioned problems, an enhanced rice disease recognition model leveraging the improved YOLOv7-Tiny is proposed. Specifically, in order to reduce the interference of complex background, the YOLOv7-Tiny model’s backbone network has been enhanced by incorporating the Convolutional Block Attention Module (CBAM); subsequently, to address the irregularity issue in the disease region, the RepGhost bottleneck module, which is based on structural reparameterization techniques, has been introduced; Finally, to resolve the classification and localization issue, a lightweight YOLOX decoupled head has been proposed. The experimental results have demonstrated that: (1) The enhanced YOLOv7-Tiny model demonstrated elevated F1 scores and mAP@.5, achieving 0.894 and 0.922, respectively, on the rice pest and disease dataset. These scores exceeded the original YOLOv7-Tiny model’s performance by margins of 3.1 and 2.2 percentage points, respectively. (2) In comparison to the YOLOv3-Tiny, YOLOv4-Tiny, YOLOv5-S, YOLOX-S, and YOLOv7-Tiny models, the enhanced YOLOv7-Tiny model achieved higher F1 scores and mAP@.5. The improved YOLOv7-Tiny model boasts a single image inference time of 26.4 ms, satisfying the requirement for real-time identification of rice diseases and facilitating deployment in embedded devices.