Incomplete multiview clustering (IMC) is a hot and emerging topic. It is well known that unavoidable data incompleteness greatly weakens the effective information of multiview data. To date, existing IMC methods usually bypass unavailable views according to prior missing information, which is considered a second-best scheme based on evasion. Other methods that attempt to recover missing information are mostly applicable to specific two-view datasets. To handle these problems, in this article, we propose an information-recovery-driven-deep IMC network, termed as RecFormer. Concretely, a two-stage autoencoder network with self-attention structure is built to synchronously extract high-level semantic representations of multiple views and recover the missing data. Besides, we develop a recurrent graph reconstruction mechanism that cleverly leverages the restored views to promote representation learning and further data reconstruction. Visualization of recovery results are given and sufficient experimental results confirm that our RecFormer has obvious advantages over other top methods.

In recent years, multi-view multi-label learning has aroused extensive research enthusiasm. However, multi-view multi-label data in the real world is commonly incomplete due to the uncertain factors of data collection and manual annotation, which means that not only multi-view features are often missing, and label completeness is also difficult to be satisfied. To deal with the double incomplete multi-view multi-label classification problem, we propose a deep instance-level contrastive network, namely DICNet. Different from conventional methods, our DICNet focuses on leveraging deep neural network to exploit the high-level semantic representations of samples rather than shallow-level features. First, we utilize the stacked autoencoders to build an end-to-end multi-view feature extraction framework to learn the view-specific representations of samples. Furthermore, in order to improve the consensus representation ability, we introduce an incomplete instance-level contrastive learning scheme to guide the encoders to better extract the consensus information of multiple views and use a multi-view weighted fusion module to enhance the discrimination of semantic features. Overall, our DICNet is adept in capturing consistent discriminative representations of multi-view multi-label data and avoiding the negative effects of missing views and missing labels. Extensive experiments performed on five datasets validate that our method outperforms other state-of-the-art methods.

As we all know, multi-view data is more expressive than single-view data and multi-label annotation enjoys richer supervision information than single-label, which makes multi-view multi-label learning widely applicable for various pattern recognition tasks. In this complex representation learning problem, three main challenges can be characterized as follows: i) How to learn consistent representations of samples across all views? ii) How to exploit and utilize category correlations of multi-label to guide inference? iii) How to avoid the negative impact resulting from the incompleteness of views or labels? To cope with these problems, we propose a general multi-view multi-label learning framework named label-guided masked view- and category-aware transformers in this paper. First, we design two transformer-style based modules for cross-view features aggregation and multi-label classification, respectively. The former aggregates information from different views in the process of extracting view-specific features, and the latter learns subcategory embedding to improve classification performance. Second, considering the imbalance of expressive power among views, an adaptively weighted view fusion module is proposed to obtain view-consistent embedding features. Third, we impose a label manifold constraint in sample-level representation learning to maximize the utilization of supervised information. Last but not least, all the modules are designed under the premise of incomplete views and labels, which makes our method adaptable to arbitrary multi-view and multi-label data. Extensive experiments on five datasets confirm that our method has clear advantages over other state-of-the-art methods.

Protein function prediction is critical for understanding the cellular physiological and biochemical processes, and it opens up new possibilities for advancements in fields such as disease research and drug discovery. During the past decades, with the exponential growth of protein sequence data, many computational methods for predicting protein function have been proposed. Therefore, a systematic review and comparison of these methods are necessary. In this study, we divide these methods into four different categories, including sequence-based methods, 3D structure-based methods, PPI network-based methods and hybrid information-based methods. Furthermore, their advantages and disadvantages are discussed, and then their performance is comprehensively evaluated and compared. Finally, we discuss the challenges and opportunities present in this field.

As a combination of emerging multi-view learning methods and traditional multi-label classification tasks, multi-view multi-label classification has shown broad application prospects. The diverse semantic information contained in heterogeneous data effectively enables the further development of multi-label classification. However, the widespread incompleteness problem on multi-view features and labels greatly hinders the practical application of multi-view multi-label classification. Therefore, in this paper, we propose an attention-induced missing instances imputation technique to enhance the generalization ability of the model. Different from existing incomplete multi-view completion methods, we attempt to approximate the latent features of missing instances in embedding space according to cross-view joint attention, instead of recovering missing views in kernel space or original feature space. Accordingly, multi-view completed features are dynamically weighted by the confidence derived from joint attention in the late fusion phase. In addition, we propose a multi-view multi-label classification framework based on label-semantic feature learning, utilizing the statistical weak label correlation matrix and graph attention network to guide the learning process of label-specific features. Finally, our model is compatible with missing multi-view and partial multi-label data simultaneously and extensive experiments on five datasets confirm the advancement and effectiveness of our embedding imputation method and multi-view multi-label classification model.

As the most common complication of diabetes, diabetic retinopathy (DR) is one of the main causes of irreversible blindness. Automatic DR grading plays a crucial role in early diagnosis and intervention, reducing the risk of vision loss in people with diabetes. In these years, various deep-learning approaches for DR grading have been proposed. Most previous DR grading models are trained using the dataset of single-field fundus images, but the entire retina cannot be fully visualized in a single field of view. There are also problems of scattered location and great differences in the appearance of lesions in fundus images. To address the limitations caused by incomplete fundus features, and the difficulty in obtaining lesion information. This work introduces a novel multi-view DR grading framework, which solves the problem of incomplete fundus features by jointly learning fundus images from multiple fields of view. Furthermore, the proposed model combines multi-view inputs such as fundus images and lesion snapshots. It utilizes heterogeneous convolution blocks (HCB) and scalable self-attention classes (SSAC), which enhance the ability of the model to obtain lesion information. The experimental results show that our proposed method performs better than the benchmark methods on the large-scale dataset.