Yang Du

Prof. Yang Du

orcid

Research Focus & Metrics

Academic Career Length

11Years (2016-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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3 May 2023 in Signal Transduction and Targeted Therapy
Verified
Journal Article
Open access
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TWThian-Sze Wong
Thian-Sze Wong
GLGuangzhi Li
Guangzhi Li
SLShiliang Li
Shiliang Li
WGWei Gao
Wei Gao
GCGeng Chen
Geng Chen
YDYang Du
Yang Du
Neuropsychiatric disorders are multifactorial disorders with diverse aetiological factors. Identifying treatment targets is challenging because the diseases are resulting from heterogeneous biological, genetic, and environmental factors. Nevertheless, the increasing understanding of G protein-coupled receptor (GPCR) opens a new possibility in drug discovery. Harnessing our knowledge of molecular mechanisms and structural information of GPCRs will be advantageous for developing effective drugs. This review provides an overview of the role of GPCRs in various neurodegenerative and psychiatric diseases. Besides, we highlight the emerging opportunities of novel GPCR targets and address recent progress in GPCR drug development.

30 September 2022 in Science
Verified
Journal Article
Closed access
EFElissa A. Fink
Elissa A. Fink
JXJun Xu
Jun Xu
HHHarald Hübner
Harald Hübner
JBJoao M. Braz
Joao M. Braz
PSPhilipp Seemann
Philipp Seemann
PGPeter Gmeiner
Peter Gmeiner
Because nonopioid analgesics are much sought after, we computationally docked more than 301 million virtual molecules against a validated pain target, the α 2A -adrenergic receptor (α 2A AR), seeking new α 2A AR agonists chemotypes that lack the sedation conferred by known α 2A AR drugs, such as dexmedetomidine. We identified 17 ligands with potencies as low as 12 nanomolar, many with partial agonism and preferential G i and G o signaling. Experimental structures of α 2A AR complexed with two of these agonists confirmed the docking predictions and templated further optimization. Several compounds, including the initial docking hit ‘9087 [mean effective concentration (EC 50 ) of 52 nanomolar] and two analogs, ‘7075 and PS75 (EC 50 4.1 and 4.8 nanomolar), exerted on-target analgesic activity in multiple in vivo pain models without sedation. These newly discovered agonists are interesting as therapeutic leads that lack the liabilities of opioids and the sedation of dexmedetomidine.

1 February 2021 in Cell
Verified
Journal Article
Closed access
PXPeng Xiao
Peng Xiao
WYWei Yan
Wei Yan
LGLu Gou
Lu Gou
YZYa-Ni Zhong
Ya-Ni Zhong
LKLiangliang Kong
Liangliang Kong
ZSZhenhua Shao
Zhenhua Shao

22 June 2020 in Nature Communications
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Journal Article
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HKHee Ryung Kim
Hee Ryung Kim
JXJun Xu
Jun Xu
SMShoji Maeda
Shoji Maeda
NDNguyen Minh Duc
Nguyen Minh Duc
DADonghoon Ahn
Donghoon Ahn
KCKa Young Chung
Ka Young Chung
Heterotrimeric G proteins are categorized into four main families based on their function and sequence, Gs, Gi/o, Gq/11, and G12/13. One receptor can couple to more than one G protein subtype, and the coupling efficiency varies depending on the GPCR-G protein pair. However, the precise mechanism underlying different coupling efficiencies is unknown. Here, we study the structural mechanism underlying primary and secondary Gi/o coupling, using the muscarinic acetylcholine receptor type 2 (M2R) as the primary Gi/o-coupling receptor and the β2-adrenergic receptor (β2AR, which primarily couples to Gs) as the secondary Gi/o-coupling receptor. Hydrogen/deuterium exchange mass spectrometry and mutagenesis studies reveal that the engagement of the distal C-terminus of Gαi/o with the receptor differentiates primary and secondary Gi/o couplings. This study suggests that the conserved hydrophobic residue within the intracellular loop 2 of the receptor (residue 34.51) is not critical for primary Gi/o-coupling; however, it might be important for secondary Gi/o-coupling.

24 January 2022 in Nature Communications
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Journal Article
Open access
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QWQinggong Wang
Qinggong Wang
QLQiuyuan Lu
Qiuyuan Lu
QGQiong Guo
Qiong Guo
MTMaikun Teng
Maikun Teng
QGQingguo Gong
Qingguo Gong
YTYuyong Tao
Yuyong Tao
Melatonin receptors (MT1and MT2in humans) are family A G protein–coupled receptors that respond to the neurohormone melatonin to regulate circadian rhythm and sleep. Numerous efforts have been made to develop drugs targeting melatonin receptors for the treatment of insomnia, circadian rhythm disorder, and cancer. However, designing subtype-selective melatonergic drugs remains challenging. Here, we report the cryo-EM structures of the MT1–Gisignaling complex with 2-iodomelatonin and ramelteon and the MT2–Gisignaling complex with ramelteon. These structures, together with the reported functional data, reveal that although MT1and MT2possess highly similar orthosteric ligand-binding pockets, they also display distinctive features that could be targeted to design subtype-selective drugs. The unique structural motifs in MT1and MT2mediate structural rearrangements with a particularly wide opening on the cytoplasmic side. Giis engaged in the receptor core shared by MT1and MT2and presents a conformation deviating from those in other Gicomplexes. Together, our results provide new clues for designing melatonergic drugs and further insights into understanding the G protein coupling mechanism.

2 January 2024 in Nature Communications
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Journal Article
Open access
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DWDandan Wang
Dandan Wang
QGQiong Guo
Qiong Guo
ZWZhangsong Wu
Zhangsong Wu
MLMing Li
Ming Li
BHBinbin He
Binbin He
YTYuyong Tao
Yuyong Tao
Histamine receptors are a group of G protein-coupled receptors (GPCRs) that play important roles in various physiological and pathophysiological conditions. Antihistamines that target the histamine H1 receptor (H1R) have been widely used to relieve the symptoms of allergy and inflammation. Here, to uncover the details of the regulation of H1R by the known second-generation antihistamines, thereby providing clues for the rational design of newer antihistamines, we determine the cryo-EM structure of H1R in the apo form and bound to different antihistamines. In addition to the deep hydrophobic cavity, we identify a secondary ligand-binding site in H1R, which potentially may support the introduction of new derivative groups to generate newer antihistamines. Furthermore, these structures show that antihistamines exert inverse regulation by utilizing a shared phenyl group that inserts into the deep cavity and block the movement of the toggle switch residue W4286.48. Together, these results enrich our understanding of GPCR modulation and facilitate the structure-based design of novel antihistamines.