The WD40 gene family is a highly conserved protein family in plants that plays a crucial role in various life activities. Although eggplant (Solanum melongena L.) genome sequencing has been completed, there is limited research on the WD40 family in eggplant, and the regulatory mechanism of its involvement in anthocyanin synthesis remains poorly understood. The research identified the eggplant WD40 gene family, comprising 187 SmWD40 members that are unevenly distributed across 12 chromosomes of the eggplant. Phylogenetic analysis classified them into 11 subgroups, with members within the same subgroup having similar motifs and gene structures. The promoter of the SmWD40 genes contains a high number of light, stress, and hormone response elements. The expression patterns of 20 SmWD40 members of the S5 subgroup were analyzed during the formation of fruit color in long purple eggplant. Subsequently, we used virus-induced gene silencing (VIGS) to confirm the significance of the TTG1 (SmWD40-56) gene in subgroup S5 for anthocyanin synthesis in eggplant fruit. To investigate the molecular mechanism of SmWD40-56 in eggplant fruit color formation, we analyzed the expression patterns of structural genes for anthocyanin synthesis in eggplant fruit silenced for SmWD40-56. Finally, we predicted the protein interaction network of the SmWD40-56 gene to understand its potential regulatory mechanisms. The result showed that SmWD40-56 may regulate the structural genes involved in anthocyanin biosynthesis and plays an important role in eggplant fruit color formation. This study provides some basis for studying the mechanism of eggplant fruit color formation.

The MYB transcription factors (TFs) have substantial functions in anthocyanin synthesis as well as being widely associated with plant responses to various adversities. In the present investigation, we found an unreported MYB TF from Solanum aculeatissimum (a wild relative of eggplant) and named it SaMYB113 in reference to its homologous gene. Bioinformatics analysis demonstrated that the open reading frame of SaMYB113 was 825 bp in length, encoding 275 amino acids, with a typical R2R3-MYB gene structure, and predicted subcellular localization in the nucleus. Analysis of the tissue-specific expression pattern through qRT-PCR showed that the SaMYB113 was expressed at a high level in young stems as well as leaves of S. aculeatissimum. Transgenic Arabidopsis and tobacco plants overexpressing SaMYB113 pertinent to the control of the 35S promoter exhibited a distinct purple color trait, suggesting a significant change in their anthocyanin content. Furthermore, we obtained three tobacco transgenic lines with significant differences in anthocyanin accumulation and analyzed the differences in anthocyanin content by LC-MS/MS. The findings demonstrated that overexpression of SaMYB113 caused tobacco to have considerably raised levels of several anthocyanin components, with the most significant increases in delphinidin-like anthocyanins and cyanidin-like anthocyanins. The qRT-PCR findings revealed significant differences in the expression levels of structural genes for anthocyanin synthesis among various transgenic lines. In summary, this study demonstrated that the SaMYB113 gene has a substantial impact on anthocyanin synthesis, and overexpression of the SaMYB113 gene leads to significant modifications to the expression levels of a variety of anthocyanin-synthesizing genes, which leads to complex changes in anthocyanin content and affects plant phenotypes. This present research offers the molecular foundation for the research of the mechanism of anthocyanin formation within plants, as well as providing some reference for the improvement of traits in solanum crops.