We present a variational framework that integrates the statistical boundary shape models into a Level Set system that is capable of both segmenting and recognizing objects. Since we aim to recognize objects, we trace the active contour and stop it near real object boundaries while inspecting the shape of the contour instead of enforcing the contour to get a priori shape. We get the location of character boundaries and character labels at the system output. We developed a promising local front stopping scheme based on both image and shape information for fast marching systems. A new object boundary shape signature model, based on directional Gauss gradient filter responses, is also proposed. The character recognition system that employs the new boundary shape descriptor outperforms the other systems, based on well-known boundary signatures such as centroid distance, curvature etc
Cervical carcinoma is one of the frequently seen cancers in the world and in our country, develops from precursor lesions. These precursor lesions are analyzed by pathologists so that the diagnosis of the disease can be made. In this study, a system that performs automatic detection of pre-cancerous lesions was performed using the convolutional neural networks (CNNs). In the training phase, lesion recognition performance of the proposed system has reached 92%. Thereafter, whole image was segmented by using 60 × 60 pixel tiles during the training phase. After all, the precursor lesions were segmented with 81.71% Dice coefficient.
Breast cancer, a widespread and life-threatening disease, necessitates precise diagnostic tools for improved patient outcomes. Tumor-Infiltrating Lymphocytes (TILs), reflective of the immune response against cancer cells, are pivotal in understanding breast cancer behavior. However, inter-observer variability in TILs scoring methods poses challenges to reliable assessments. This study introduces a novel and interpretable proof-of-principle framework comprising two innovative inter-observer agreement measures. The first method, Boundary-Weighted Fleiss’ Kappa (BWFK), addresses tissue segmentation predictions, focusing on mitigating disagreements along tissue boundaries. BWFK enhances the accuracy of stromal segmentation, providing a nuanced assessment of inter-observer agreement. The second proposed method, the Distance Based Cell Agreement Algorithm (DBCAA), eliminates the need for ground truth annotations in cell detection predictions. This innovative approach offers versatility across histopathological analyses, overcoming data availability challenges. Both methods were applied to assess inter-observer agreement using a clinical image dataset consisting of 25 images of invasive ductal breast carcinoma tissue, each annotated by four pathologists, serving as a proof-of-principle. Experimental investigations demonstrated that the BWFK method yielded gains of up to 32% compared to the standard Fleiss’ Kappa model. Furthermore, a procedure for conducting clinical validations of artificial intelligence (AI) based cell detection methods was elucidated. Thoroughly validated on a clinical dataset, the framework contributes to standardized, reliable, and interpretable inter-observer agreement assessments. This study is the first examination of inter-observer agreements in stromal segmentation and lymphocyte detection for the TILs scoring problem. The study emphasizes the potential impact of these measures in advancing histopathological image analysis, fostering consensus in TILs scoring, and ultimately improving breast cancer diagnostics and treatment planning. The source code and implementation guide for this study are accessible on our GitHub page, and the full clinical dataset is available for academic and research purposes on Kaggle.
1 January 2003 in Lecture Notes in Computer Science
This study proposes a unique approach to classify CerbB2 tumor cell scores in breast cancer based on deep learning models. Another contribution of the study is the creation of a dataset from original breast cancer tissues. On the purpose of training, validating and testing with deep learning models cell fragments were generated from sample tissue images. CerbB2 tumor scores were generated for the cell fragments were classified with high performance by the aid of convolutional neural networks (CNN).