Dylan Ferreira

Dr. Dylan Ferreira

orcid

Research Focus & Metrics

Academic Career Length

10Years (2017-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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2 March 2017 in Molecular Oncology
Verified
Journal Article
Open access
PDF file
SCSofia Cotton
Sofia Cotton
Rita AzevedoRita Azevedo
Rita Azevedo
CGCristiana Gaiteiro
Cristiana Gaiteiro
DFDylan Ferreira
Dylan Ferreira
IPO-Porto LimaIPO-Porto Lima
IPO-Porto Lima
José Alexandre FerreiraJosé Alexandre Ferreira
José Alexandre Ferreira
Bladder carcinogenesis and tumour progression is accompanied by profound alterations in protein glycosylation on the cell surface, which may be explored for improving disease management. In a search for prognosis biomarkers and novel therapeutic targets we have screened, using immunohistochemistry, a series of bladder tumours with differing clinicopathology for short‐chain O‐glycans commonly found in glycoproteins of human solid tumours. These included the Tn and T antigens and their sialylated counterparts sialyl‐Tn(STn) and sialyl‐T(ST), which are generally associated with poor prognosis. We have also explored the nature of T antigen sialylation, namely the sialyl‐3‐T(S3T) and sialyl‐6‐T(S6T) sialoforms, based on combinations of enzymatic treatments. We observed a predominance of sialoglycans over neutral glycoforms (Tn and T antigens) in bladder tumours. In particular, the STn antigen was associated with high‐grade disease and muscle invasion, in accordance with our previous observations. The S3T and S6T antigens were detected for the first time in bladder tumours, but not in healthy urothelia, highlighting their cancer‐specific nature. These glycans were also overexpressed in advanced lesions, especially in cases showing muscle invasion. Glycoproteomic analyses of advanced bladder tumours based on enzymatic treatments, Vicia villosa lectin‐affinity chromatography enrichment and nanoLC‐ESI‐MS/MS analysis resulted in the identification of several key cancer‐associated glycoproteins (MUC16, CD44, integrins) carrying altered glycosylation. Of particular interest were MUC16 STn+‐glycoforms, characteristic of ovarian cancers, which were found in a subset of advanced‐stage bladder tumours facing the worst prognosis. In summary, significant alterations in the O‐glycome and O‐glycoproteome of bladder tumours hold promise for the development of novel noninvasive diagnostic tools and targeted therapeutics. Furthermore, abnormal MUC16 glycoforms hold potential as surrogate biomarkers of poor prognosis and unique molecular signatures for designing highly specific targeted therapeutics.

1 January 2020 in Theranostics
Verified
Journal Article
Open access
Elisabete FernandesElisabete Fernandes
Elisabete Fernandes
JSJanine Sores
Janine Sores
SCSofia Cotton
Sofia Cotton
APAndreia Peixoto
Andreia Peixoto
DFDylan Ferreira
Dylan Ferreira
José Alexandre FerreiraJosé Alexandre Ferreira
José Alexandre Ferreira
Esophageal (OC), gastric (GC) and colorectal (CRC) cancers are amongst the digestive track tumors with higher incidence and mortality due to significant molecular heterogeneity. This constitutes a major challenge for patients' management at different levels, including non-invasive detection of the disease, prognostication, therapy selection, patient's follow-up and the introduction of improved and safer therapeutics. Nevertheless, important milestones have been accomplished pursuing the goal of molecular-based precision oncology. Over the past five years, high-throughput technologies have been used to interrogate tumors of distinct clinicopathological natures, generating large-scale biological datasets (e.g. genomics, transcriptomics, and proteomics). As a result, GC and CRC molecular subtypes have been established to assist patient stratification in the clinical settings. However, such molecular panels still require refinement and are yet to provide targetable biomarkers. In parallel, outstanding advances have been made regarding targeted therapeutics and immunotherapy, paving the way for improved patient care; nevertheless, important milestones towards treatment personalization and reduced off-target effects are also to be accomplished. Exploiting the cancer glycoproteome for unique molecular fingerprints generated by dramatic alterations in protein glycosylation may provide the necessary molecular rationale towards this end. Therefore, this review presents functional and clinical evidences supporting a reinvestigation of classical serological glycan biomarkers such as sialyl-Tn (STn) and sialyl-Lewis A (SLeA) antigens from a tumor glycoproteomics perspective. We anticipate that these glycobiomarkers that have so far been employed in non-invasive cancer prognostication may hold unexplored value for patients' management in precision oncology settings.

15 August 2018 in Scientific Reports
Verified
Journal Article
Open access
PDF file
LLLiliana R. Loureiro
Liliana R. Loureiro
DSDiana P. Sousa
Diana P. Sousa
DFDylan Ferreira
Dylan Ferreira
WCWengang Chai
Wengang Chai
IPO-Porto LimaIPO-Porto Lima
IPO-Porto Lima
PVPaula Videira
Paula Videira
Incomplete O-glycosylation is a feature associated with malignancy resulting in the expression of truncated glycans such as the sialyl-Tn (STn) antigen. Despite all the progress in the development of potential anti-cancer antibodies, their application is frequently hindered by low specificities and cross-reactivity. In this study, a novel anti-STn monoclonal antibody named L2A5 was developed by hybridoma technology. Flow cytometry analysis showed that L2A5 specifically binds to sialylated structures on the cell surface of STn-expressing breast and bladder cancer cell lines. Moreover, immunoblotting assays demonstrated reactivity to tumour-associated O-glycosylated proteins, such as MUC1. Tumour recognition was further observed using immunohistochemistry assays, which demonstrated a high sensitivity and specificity of L2A5 mAb towards cancer tissue, using bladder and colorectal cancer tissues. L2A5 staining was exclusively tumoural, with a remarkable reactivity in invasive and metastasis sites, not detectable by other anti-STn mAbs. Additionally, it stained 20% of cases of triple-negative breast cancers, suggesting application in diseases with unmet clinical needs. Finally, the fine specificity was assessed using glycan microarrays, demonstrating a highly specific binding of L2A5 to core STn antigens and additional ability to bind 2–6-linked sialyl core-1 probes. In conclusion, this study describes a novel anti-STn antibody with a unique binding specificity that can be applied for cancer diagnostic and future development of new antibody-based therapeutic applications.

1 December 2017 in Urologic Oncology: Seminars and Original Investigations
Verified
Journal Article
Closed access
IPO-Porto LimaIPO-Porto Lima
IPO-Porto Lima
MNManuel Neves
Manuel Neves
MOMarta I. Oliveira
Marta I. Oliveira
LDLorena Dieguez
Lorena Dieguez
RFRui Freitas
Rui Freitas
José Alexandre FerreiraJosé Alexandre Ferreira
José Alexandre Ferreira

1 October 2019 in International Journal of Pharmaceutics
Verified
Journal Article
Closed access
Elisabete FernandesElisabete Fernandes
Elisabete Fernandes
DFDylan Ferreira
Dylan Ferreira
APAndreia Peixoto
Andreia Peixoto
RFRui Freitas
Rui Freitas
MRMarta Relvas-Santos
Marta Relvas-Santos
José Alexandre FerreiraJosé Alexandre Ferreira
José Alexandre Ferreira

1 July 2018 in Talanta
Verified
Journal Article
Closed access
Rita AzevedoRita Azevedo
Rita Azevedo
JSJanine Soares
Janine Soares
CGCristiana Gaiteiro
Cristiana Gaiteiro
APAndreia Peixoto
Andreia Peixoto
IPO-Porto LimaIPO-Porto Lima
IPO-Porto Lima
José Alexandre FerreiraJosé Alexandre Ferreira
José Alexandre Ferreira