Lake Okeechobee is one of the largest freshwater lakes in the United States. As a eutrophic lake, it has frequent algal blooms composed predominantly of the cyanobacterium genus Microcystis. Many of the algal blooms are associated with the resuspension of a thixotropic benthic mud containing legacy nutrients. Since Lake Okeechobee has an area of 1732 km² (40–50 km radius) and a mean depth of only 2.7 m, there is sufficient fetch and shallow water depth to allow frequent wind, wave, and current generated events, which cause sediment resuspension. Three types of mud exist in the lake including an immobile dark-colored, consolidated mud, a brownish-colored mud, which is poorly consolidated and mobile, and a dark-colored thixotropic, highly mobile mud that is a mixture of organic matter and clay-sized minerals. Altogether, these muds contain an estimated 4.6 × 10⁶ kg of total phosphorus and commensurate high amounts of labile nitrogen. The thixotropic mud covers most of the lakebed and contains the suitable nutrient ratios to trigger algal blooms. A bioassay analysis of the thixotropic mud compared to the consolidated mud showed that it produced up to 50% more nutrient mass compared to the consolidated mud. The thixotropic mud does not consolidate, thus remains mobile. The mobility is maintained by the dynamics of the algal blooms and bacterial decay of extracellular secretions (transparent exopolymer particles) that bind sediment, transfer it to the bottom, and undergo bacterial digestion causing gas emissions, thus maintaining the organic/sediment matrix in suspension. Despite major efforts to control external nutrient loading into the lake, the high frequency of algal blooms will continue until the muds bearing legacy nutrients are removed from the lake.

A very detailed water budget analysis was conducted on Lake Trafford in South Florida. The inflow was dominated by surface water influx via five canals (61%), with groundwater influx constituting 12% and direct rainfall constituting 27%. Lake discharge was dominated by sheet flow (69%) and evapotranspiration (30.5%), with groundwater recharge of the hydraulically connected unconfined aquifer accounting for only 0.5%. The removal of 30 M tons (4.4 × 10⁶ m³) of organic sediment impacted the groundwater influx, causing enhanced groundwater flow into the deeper parts of the lake and mixed flow along the banks, creating a rather unusual pattern. The large number of groundwater seepage meters used during this investigation led to a very reliable set of measurements with occasional failure of only a few meters. A distinctive relationship was found between the wet-season lake stage, heavy rainfall events, and pulses of exiting sheet flow from the lake. Estimation of the evapotranspiration loss using data collected from a weather station on the lake allowed the use of three different models, which, when averaged, produced results comparable to Lake Okeechobee (South Florida). A limitation of this investigation was the inability to directly measure sheet-flow discharges, which had to be estimated as a residual within the calculated water budget.

Lake Trafford, a 600-ha subtropical lake in southwestern Florida, has suffered from over 50 years of cultural eutrophication, resulting in the invasion of Hydrilla verticillata and organic sediment accumulation due to herbicide treatments. This study aimed to assess the effects of dredging on nutrient dynamics. A pre-dredging nutrient budget, developed using land use models and climatic data, estimated nutrient loads of 190 kg d⁻¹ for total nitrogen (TN) and 18.6 kg d⁻¹ for total phosphorus (TP), with total maximum daily loads (TMDLs) of 70.4 kg d⁻¹ for TN and 4.15 kg d⁻¹ for TP. Post-dredging analysis, using detailed spatiotemporal data, showed higher nutrient loads of 274.3 kg d⁻¹ for TN and 24.2 kg d⁻¹ for TP. While dredging reduced legacy nutrient accumulation, it led to increased nutrient influx from groundwater, caused by the exposure of organic sediment, as evidenced by increased lake water electrical conductivity. These findings demonstrate the importance of conducting thorough pre-dredging assessments to mitigate unintended consequences, offering practical insights for managing nutrient loads and improving restoration strategies in eutrophic lakes.

A very detailed water budget was conducted on Lake Trafford in southern Florida. The inflow was dominated by surface-water influx via five canals (61%) with groundwater influx constituting 12% and direct rainfall 27%. Lake discharge was dominated by sheet-flow (69%) and evapotranspiration (30.5%) with groundwater recharge of the hydraulically connected unconfined aquifer accounting for only 0.5%. Removal of 30 M tons (4.4 x 106 m3) of organic sediment impacted groundwater influx, causing enhanced groundwater flows into the deeper parts of the lake and mixed flows along the banks creating a rather unusual pattern. The large number of groundwater seepage meters used during the investigation led to a very reliable set of measurements with occasional failure of only a few meters. A distinctive relationship was found between the wet season lake stage, heavy rainfall events and pulses of exiting sheet-flow from the lake. Estimation of the evapotranspiration loss using data collected from a weather station on the lake allowed the use of three different models which, when averaged, produced results comparable to Lake Okeechobee (southern Florida). A limitation of the investigation was the inability to directly measure sheet-flow discharges, which had to be estimated as a residual within the calculated water budget.

Copper (Cu) is both an essential micronutrient and a pollutant, with its effects depending on its concentration, environmental context, and the species and life history stages of the organisms exposed. To advance the understanding of copper effects in the context of variation in other environmental conditions, eastern oyster (Crassostrea virginica) spat recruitment and adult tissue copper concentration [Cu] were monitored in conjunction with water column [Cu], salinity, pH, dissolved oxygen, and temperature for a year at five sites in or near Naples Bay, Florida, an urbanized estuary with some of the highest copper pollution levels in the US. Relationships among the environmental variables were explored using principal component analysis, then the effects of key variables on oyster responses were assessed using regression models and multi-model comparison. There were significant differences among sites and dates in terms of salinity, water column and tissue [Cu], and spat recruitment. Tissue [Cu] was high, up to 2868 ppm, and was correlated with high water column [Cu] in parts of the estuary (up to 7.55 mg/L). Oyster tissue [Cu] was best predicted by a linear model incorporating both salinity and water column [Cu], and oyster spat recruitment was best modeled using a polynomial fit to salinity and a negative linear relationship with water column [Cu]. This is consistent with the hypothesis that high [Cu] in conjunction with low salinities reduces spat recruitment in this system, but alternative hypotheses cannot be excluded without further assessment. Given these findings, hydrologic restoration to stabilize salinity regimes and management actions to eliminate copper pollution sources are recommended to protect oysters and improve ecological integrity in the system.