Because of significant yield losses caused by fungal pathogens, new efficient and environmentally safe methods of pest control are needed, and amphiphilic compounds (biosurfactants) produced by many microbes are considered a good alternative. In the present study, biosurfactants produced by the rhizosphere isolate Bacillus mojavensis P1709 were assessed for their ability to protect postharvest cherry tomatoes from decay and mycotoxin contamination caused by Fusarium oxysporum f. sp. lycopersici. It was demonstrated that the genome of B. mojavensis P1709 contained the fenD and srfAA genes, which are responsible for the synthesis of compounds of the fengycin and surfactin families. APF (acid-precipitated fraction) of B. mojavensis P1709 culture medium at a concentration of 20 g L⁻¹ inhibited pathogen radial growth on agar plates by 93%, and T-2 and HT-2 mycotoxin production by 98%, after 5 days of cultivation. APF also suppressed fungal growth in the in vivo test on cherry tomato fruits by 93% and 25% on the 2nd and 7th days of incubation, respectively. The results obtained demonstrate that biosurfactants produced by B. mojavensis P1709 are an efficient tool for protecting postharvest cherry tomatoes from fungal mold decay and mycotoxin contamination.

Antibiotics enter the soil with compost prepared from livestock manures and other sources. There is concern that they may influence plant growth and cause antibiotic resistance in soil and plant endospheric microbiomes. In the present work, lettuce plants were cultivated in soil and hydroponics spiked with oxytetracycline (0, 15, and 300 mg × kg⁻¹ and 0, 15, and 50 mg × L^–1, respectively) during a 28-day greenhouse experiment. It was revealed that the antibiotic reduced the chlorophyll content, the biomass, and the length of the roots and stems by 1.4–4.7, 1.8–39, 2.5–3.2, and 1.8–6.3 times in soil and in hydroponics. The copy numbers of the tet(A) and tet(X) genes were revealed to be 4.51 × 10³–1.58 × 10⁵ and 8.36 × 10⁶–1.07 × 10⁸ copies × g^–1, respectively, suggesting the potential migration of these genes from soil/hydroponics to plant roots and leaves. According to a non-metric multidimensional scaling (NMDS) analysis of the 16S rRNA amplicon sequencing data, endospheric bacterial communities were similar in leaves and roots independent of the growing substrate and antibiotic concentration. While soil bacterial communities were unaffected by the presence of antibiotics, hydroponic communities exhibited dependency, likely attributable to the absence of the mitigating effect of soil particle absorption.

Plant-associated microbiomes play a critical role in plant health, nutrition, growth, and adaptation. This study aimed to investigate the formation pathways of the endospheric microbiome in lettuce (Lactuca sativa) through vertical (seed) and horizontal (substrate) transmission in hydroponic and soil environments. The bacterial microbiomes from the seeds, roots, leaves, and substrates were analyzed via 16S rRNA gene sequencing. The seed microbiome contained 236 OTUs dominated by Verrucomicrobia (31%) and Firmicutes (29%). Rhizospheric soil contained 1594 OTUs, while the hydroponic solution had 448 OTUs. The root endosphere from soil-grown lettuce contained 295 OTUs, compared with 177 in hydroponic conditions, and the leaf microbiome contained 43 OTUs in soil and 115 OTUs in hydroponics. In total, 30–51% of the leaf and root microbiomes originated from the seed microbiota, while 53–65% of the root microbiome originated from the substrate. Microbiome overlap was observed between the rhizospheric soil and the root microbiome. This study provides new insights into the microbiome of lettuce seeds and the pathways of formation of the endospheric microbiome in adult plants. These findings lay the groundwork for future research aimed at better understanding microbiome dynamics in leafy crops and plant protection.

Microorganisms play an important role in the growth and development of a plant throughout its entire life cycle. Recent advances in the methods of molecular biological analysis have expanded our understanding of the composition and functions of plant microbiota (epiphytic, rhizosphere, and endosphere) and the molecular mechanisms associated with specific processes that govern plant-microorganism interactions. This article reviews the types of plant microbial communities, their sources of origin, and species composition, as well as the critical role they play in modulating the plant immune response against phytopathogens, improving the elemental nutrition of plants, scaring away herbivorous animals, producing phytohormones, and enabling plants to thrive under extreme environmental conditions.

The search for new biodegradable fertilizers to increase the productivity of agricultural plants is an urgent task. In this study, a complex microfertilizer was developed based on a chelating agent—glutamic-N,N-diacetic acid (GLDA). The evaluation encompassed assessments of biodegradability and effectiveness in fostering lettuce plant growth in hydroponic and conventional soil settings. The impact on endospheric bacteria, a sensitive indicator, was also examined. Results indicated a 59.8% degradation rate of the GLDA complex on the 28th day. The most notable positive effects were observed in above-ground plant biomass, with a 4.6-fold increase for hydroponics and 1.5 to 1.8-fold increases for root and foliar treatments in soil. In hydroponics, GLDA-treated plants showed 24 and 45 operational taxonomic units (OTUs) for leaves and 272 and 258 for roots (GLDA-treated and control plants). In soil, the OTU counts were 270 and 101, 221 and 111, and 198 and 116 in the leaves and roots of GLDA-treated and control plants (under root and foliar treatments), respectively. Non-metric multidimensional scaling (NMDS) and Indicator Species Analysis (ISA) demonstrated significant distinctions in endospheric communities between substrates (hydroponics and soil) in the presence of GLDA. Importantly, GLDA use simplified the composition of endospheric bacterial communities.

The rapid rise in atmospheric CO₂ necessitates strategies for mitigation and valorization. Microalgae offer potential through simultaneous CO₂ capture and production of high-value biomolecules. Five Chlorophyta strains (A–E: Micractinium sp., Chlamydomonas sp., Micractinium sp., Chlorococcum sp., and Chlorella vulgaris) were isolated from temperate waters and soils and tested for growth and biochemical responses under controlled nitrogen availability (low: 0.346 g L⁻¹ nitrate; high: 0.6 g L⁻¹ nitrate + ammonia), carbon supply (low: 0.04% CO₂; high: 4% CO₂), and cultivation systems (batch reactors, fermenters, and varied illumination). Over 14 days, maximum dry biomass was achieved in batch cultivation with CO₂ sparging, low nitrogen, and continuous light, ranging from 1.47 g L⁻¹ (strain A) to 2.67 g L⁻¹ (strain D). Biomass composition varied: proteins, 25–45%; carbohydrates, 20–35%; and lipids, 18–28%. Nitrogen limitation promoted lipid accumulation (e.g., strain D: +40%) with concurrent protein decline (−25%). Chlorophyll a/b displayed strain-specific plasticity; high CO₂ generally increased chlorophyll, while nitrogen stress reduced it up to 50%. Overall, this study demonstrates that locally adapted Chlorophyta strains can achieve high biomass productivity under CO₂ enrichment while allowing for flexible redirection of carbon flux toward lipids, carbohydrates, or pigments through nutrient management. Among the tested isolates, strains D and E emerged as the most promising candidates for integrated CO₂ sequestration and biomass production, while strains B, C, and D showed strong potential for biodiesel feedstock; strain A for carbohydrate valorization; and strain E for chlorophyll extraction. Future research should focus on scale-up validation in pilot photobioreactors under continuous operation, optimization of two-stage cultivation strategies for lipid production, integration with industrial CO₂ point sources, and strain improvement using modern genomics-assisted breeding and genome-editing technologies. These efforts will support the translation of regional microalgal resources into scalable carbon-capture and bioproduct platforms.