Thomas Van Dijck

Dr. Thomas Van Dijck

orcid

Research Focus & Metrics

Academic Career Length

4Years (2023-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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14 April 2023 in Urban Ecosystems
Verified
Journal Article
Closed access
PDF file
TDThomas Van Dijck
Thomas Van Dijck
HKHeinz Klerkx
Heinz Klerkx
STSofie Thijs
Sofie Thijs
FRFrançois Rineau
François Rineau
CMCarmen Van Mechelen
Carmen Van Mechelen
TATom Artois
Tom Artois

21 June 2024 in Microorganisms
Verified
Journal Article
Open access
PDF file
TDThomas Van Dijck
Thomas Van Dijck
VSVincent Stevens
Vincent Stevens
LSLaure Steenaerts
Laure Steenaerts
STSofie Thijs
Sofie Thijs
CMCarmen Van Mechelen
Carmen Van Mechelen
FRFrançois Rineau
François Rineau
Extensive green roofs provide for many ecosystem services in urban environments. The efficacy of these services is influenced by the vegetation structure. Despite their key role in plant performance and productivity, but also their contribution to nitrogen fixation or carbon sequestration, green roof microbial communities have received little attention so far. No study included a spatiotemporal aspect to investigate the core microbiota residing in the substrates of extensive green roofs, although these key taxa are hypothesized to be amongst the most ecologically important taxa. Here, we identified the core microbiota residing in extensive green roof substrates and investigated whether microbial community composition is affected by the vegetation that is planted on extensive green roofs. Eleven green roofs from three different cities in Flanders (Belgium), planted either with a mixture of grasses, wildflowers and succulents (Sedum spp.; Sedum–herbs–grasses roofs) or solely species of Sedum (Sedum–moss roofs), were seasonally sampled to investigate prokaryotic and fungal communities via metabarcoding. Identifying the key microbial taxa revealed that most taxa are dominant phylotypes in soils worldwide. Many bacterial core taxa are capable of nitrogen fixation, and most fungal key taxa are stress-tolerant saprotrophs, endophytes, or both. Considering that soil microbes adapted to the local edaphic conditions have been found to improve plant fitness, further investigation of the core microbiome is warranted to determine the extent to which these stress-tolerant microbes are beneficial for the vegetational layer. Although Sedum–herbs–grasses roofs contained more plant species than Sedum–moss roofs, we observed no discriminant microbial communities between both roof types, likely due to sharing the same substrate textures and the vegetational layers that became more similar throughout time. Future studies are recommended to comprehensively characterize the vegetational layer and composition to examine the primary drivers of microbial community assembly processes.

18 April 2025 in Diversity
Verified
Journal Article
Open access
PDF file
JMJill Monnissen
Jill Monnissen
STSofie Thijs
Sofie Thijs
TATom Artois
Tom Artois
PJPhilippe Jouk
Philippe Jouk
EREmma Van de Reydt
Emma Van de Reydt
MMMarlies Monnens
Marlies Monnens
Meiofauna are frequently overlooked in biodiversity assessments, resulting in a lack of understanding regarding their current status, the potential impact of anthropogenic activities, and climate change. This study on the intertidal zone of the Small Beach of Ostend marks a new effort to characterize meiofaunal communities along the Belgian coast. Sampling was carried out on five separate occasions throughout the year, with abiotic data collected during each event. Collected specimens were sorted according to their taxonomic group, resulting in a retrieval of 1742 organisms. Among these, Platyhelminthes and Nematoda were most abundant. Through metabarcoding of the 18S ribosomal region, a biodiversity assessment was conducted, yielding a total of 106 Amplicon Sequence Variants (ASVs). After filtering out rare reads, 65 metazoan ASVs were retained: 18 representing Platyhelminthes, 16 Nematoda, 15 Copepoda, 12 Polychaeta, and 4 Acoela. Identification of the ASVs through blasting generated 23 unique species-level identifications. The highest species richness was observed among Proseriata and Nematoda, each comprising six different species. Additionally, four different species of Polychaeta and Copepoda, two species of Acoela, and one species of Rhabdocoela were identified. Compared to findings on similar beaches along the Belgian coast from about 40 years ago, the meiofaunal communities on this beach exhibit an overall low species richness. Finding fewer and other species might be linked to the potential impact of beach nourishments, human trampling, and climate change. However, confirming this hypothesis requires future research.

7 February 2023 in Research Square
Verified
Preprint
Open access
PDF file
TDThomas Van Dijck
Thomas Van Dijck
MJMarc Janssen
Marc Janssen
ESEugène Stassen
Eugène Stassen
FVFrançois Vankerkhoven
François Vankerkhoven
CMCarmen Mechelen
Carmen Mechelen
TATom Artois
Tom Artois
Extensive green roofs are said to increase local arthropod diversity in urban environments. Most roofs are dominated by either generalists or xerothermic species, as a result of their isolated locations and shallow substrate layers. We investigated whether biodiverse extensive green roofs (Sedum spp., forbs and grasses) attract more arthropod species than conventional extensive green roofs (only Sedum spp.) and differ in their respective community compositions. Six conventional and six biodiverse green roofs were sampled continuously for one year via pitfall traps. Ants, carabids and spiders were identified to the species level. We found 63 spider species, 47 ground beetle species and 22 ant species during our study. Spider communities were dominated by easily dispersible species of Linyphiidae, ground beetle communities by either eurytopic or xerothermic species, and ant communities by the synanthrope Lasius niger. While ant communities differed significantly between conventional and biodiverse roofs, no effect of roof type was observed for spider or ground beetle communities. We conclude that both types of green roof give similar results in the context of conserving urban arthropod diversity, at least for the taxa we investigated. In order to attract a wider variety of arthropods in urban areas we recommend the installation of green roofs that are specifically designed to increase biodiversity.

28 March 2024 in Preprints.org
Verified
Preprint
Open access
PDF file
TDThomas Van Dijck
Thomas Van Dijck
VSVincent Stevens
Vincent Stevens
LSLaure Steenaerts
Laure Steenaerts
STSofie Thijs
Sofie Thijs
CMCarmen Van Mechelen
Carmen Van Mechelen
FRFrançois Rineau
François Rineau
Extensive green roofs provide for many ecosystem services in urban environments. The efficacy of these services is influenced by the substrate characteristics and vegetational composition. Despite their key role in plant performance and productivity, or their contribution to nitrogen fixation or carbon sequestration, green roof microbial communities have received little attention so far. Here, we investigated whether microbial communities in extensive green roof substrates contain a core community, as well as whether they are affected by green roof plant diversity. Eleven green roofs, planted either with a mixture of grasses, wildflowers and succulents (Sedum spp.), or solely species of Sedum, were seasonally sampled to investigate prokaryotic and fungal communities via metabarcoding. Although Sedum-herbs-grasses roofs contained more plant species, we observed no discriminant microbial communities between both roof types, likely due to sharing the same substrate textures and the vegetational layers that became more similar throughout time. Examining key microbial taxa revealed that most taxa are also dominant phylotypes in soils across different biomes. Many bacterial core taxa are capable of nitrogen fixation and most fungal key taxa are stress-tolerant saprotrophs, endophytes, or both. Microbial community composition further revealed high similarities with aerial samples taken in urban environments. Considering the extreme edaphic conditions that periodically arise in green roof substrates, further investigation is warranted to determine the extent to which the dynamic and intriguing microbial communities are influenced by the aeromicrobiome.

26 December 2024 in Preprints.org
Verified
Preprint
Open access
PDF file
JMJill Monnissen
Jill Monnissen
STSofie Thijs
Sofie Thijs
TATom Artois
Tom Artois
PJPhilippe Jouk
Philippe Jouk
EREmma Van de Reydt
Emma Van de Reydt
MMMarlies Monnens
Marlies Monnens
Meiofauna are frequently overlooked in biodiversity assessments, resulting in a lack of understanding regarding their current status, the potential impact of anthropogenic activities, and climate change. This study on the intertidal zone of the Small Beach of Ostend marks a new effort to characterize meiofaunal communities along the Belgian coast. Sampling was carried out on five separate occasions throughout the year, with abiotic data collected during each event. Collected specimens were sorted according to their taxonomic group, resulting in a retrieval of 1,742 organisms. Among these, Platyhelminthes and Nematoda were most abundant. Through metabarcoding of the 18S ribosomal region, a biodiversity assessment was conducted, yielding a total of 106 Amplicon Sequence Variants (ASVs). After filtering out rare reads, 65 metazoan ASVs were retained: 18 representing Platyhelminthes, 16 Nematoda, 15 Copepoda, 12 Polychaeta, and four Acoela. Identification of the ASVs through blasting generated 23 unique species-level identifications. The highest species richness was observed among Proseriata and Nematoda, each comprising six different species. Additionally, four different species of Polychaeta and Copepoda, two species of Acoela, and one species of Rhabdocoela were identified. Compared to findings of similar beaches at the Belgian coast from about 40 years ago, the meiofaunal communities on this beach exhibit an overall low species richness. Finding fewer and other species might be linked to the potential impact of beach nourishments, human trampling, and climate change. However, confirming this hypothesis requires future research.