Borja Aguinagalde

Dr. Borja Aguinagalde

orcid

Research Focus & Metrics

Academic Career Length

19Years (2008-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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1 September 2011 in European Journal of Surgical Oncology
Verified
Journal Article
Closed access
Jon ZabaletaJon Zabaleta
Jon Zabaleta
BABorja Aguinagalde
Borja Aguinagalde
MFM.G. Fuentes
M.G. Fuentes
NBN. Bazterargui
N. Bazterargui
JIJ.M. Izquierdo
J.M. Izquierdo
JEJ.I. Emparanza
J.I. Emparanza

1 May 2010 in European Journal of Cardio-Thoracic Surgery
Verified
Journal Article
Closed access
BABorja Aguinagalde
Borja Aguinagalde
Jon ZabaletaJon Zabaleta
Jon Zabaleta
MFMarta Fuentes
Marta Fuentes
NBNerea Bazterargui
Nerea Bazterargui
CHCarlos Hernández
Carlos Hernández
JEJosé Ignacio Emparanza
José Ignacio Emparanza
Spontaneous pneumothorax is an extremely frequent pathology. Despite this, there is still no clear consensus on managing these patients. Therefore, we perform a systematic review and meta-analysis of the effectiveness of percutaneous aspiration compared with tube drainage for treating idiopathic spontaneous pneumothorax. Controlled, randomised clinical trials were selected, in which the effectiveness of percutaneous aspiration is compared with that of chest tube drainage, in terms of resolution of the pneumothorax and rates of relapse and hospital admission. Relevant articles were identified by searching electronic databases (e.g., Medline, EMBASE, CENTRAL, mRCT and Pascal), as well as the references of the papers found in this manner, with a cut-off date of April 2009. Quality was assessed by two independent evaluators, using the CASPe appraisal tool. Effectiveness of percutaneous aspiration is compared with that of chest tube drainage, in terms of resolution of the pneumothorax and rates of relapse and hospital admission.

10 January 2025 in Journal of Clinical Medicine
Verified
Journal Article
Open access
PDF file
Jon ZabaletaJon Zabaleta
Jon Zabaleta
BABorja Aguinagalde
Borja Aguinagalde
ILIker López
Iker López
AFArantza Fernandez-Monge
Arantza Fernandez-Monge
JLJon Ander Lizarbe
Jon Ander Lizarbe
MAMateo de Assas
Mateo de Assas
Background/Objectives: The aim of this study was to analyze whether the implementation of artificial intelligence (AI), specifically the Natural Language Processing (NLP) branch developed by OpenAI, could help a thoracic multidisciplinary tumor board (MTB) make decisions if provided with all of the patient data presented to the committee and supported by accepted clinical practice guidelines. Methods: This is a retrospective comparative study. The inclusion criteria were defined as all patients who presented at the thoracic MTB with a suspicious or first diagnosis of non-small-cell lung cancer between January 2023 and June 2023. Intervention: GPT 3.5 turbo chat was used, providing the clinical case summary presented in committee proceedings and the latest SEPAR lung cancer treatment guidelines. The application was asked to issue one of the following recommendations: follow-up, surgery, chemotherapy, radiotherapy, or chemoradiotherapy. Statistical analysis: A concordance analysis was performed by measuring the Kappa coefficient to evaluate the consistency between the results of the AI and the committee’s decision. Results: Fifty-two patients were included in the study. The AI had an overall concordance of 76%, with a Kappa index of 0.59 and a consistency and replicability of 92.3% for the patients in whom it recommended surgery (after repeating the cases four times). Conclusions: AI is an interesting tool which could help in decision making in MTBs.

1 January 2018 in Cirugía Española
Verified
Journal Article
Closed access
BABorja Aguinagalde
Borja Aguinagalde
JAJosé Luis Aranda
José Luis Aranda
PBPablo Busca
Pablo Busca
IMIvan Martínez
Ivan Martínez
IRIñigo Royo
Iñigo Royo
JZJon Zabaleta
Jon Zabaleta

5 September 2025 in PLOS ONE
Verified
Journal Article
Open access
PDF file
AGAlberto Garcia-Zamalloa
Alberto Garcia-Zamalloa
RARafael Arnay
Rafael Arnay
IRIván Castilla Castilla Rodríguez
Iván Castilla Castilla Rodríguez
JMJavier Mar
Javier Mar
JGJose Manuel Gonzalez-Cava
Jose Manuel Gonzalez-Cava
JTJorge Taboada
Jorge Taboada
Objective: To perform an external validation of a previously reported machine learning (ML) approach for predicting the diagnosis of pleural tuberculosis. Patients and Methods: We defined two cohorts: a Training group, comprising 273 out of 1,220 effusions from our prospective study (2013–2022); and a Testing group, from a retrospective analysis of 360 effusions from 832 consecutive patients in Bajo Deba health district (1996–2012). All the effusions included were exudative and lymphocytic. In Training and Testing groups respectively, 49 and 104 cases were tuberculous, 143 and 92 were malignant, and 81 and 164 were diagnosed with “other diseases”; pre-test probabilities of pleural tuberculosis were 4% and 12.7%. Variables included were: age, pH, adenosine deaminase, glucose, protein, and lactate dehydrogenase levels, and white cell counts (total and differential) in pleural fluid. We used two ML classifiers: binary (tuberculous and non-tuberculous), and three-class (tuberculous, malignant, and others); and compared them with Bayesian analysis. Results: The best binary classifier yielded a sensitivity of 88%, specificity of 98%, and accuracy of 95%. The best three-class classifier achieved the same accuracy and correctly classified 83% (77/92) of malignant cases. The ML models yielded higher positive predictive values than Bayesian analysis based on ADA > 40 U/l and lymphocyte percentage ≥ 50% (92%). Conclusions: This external validation confirms the good performance of the previously reported ML approach for predicting the diagnosis of pleural tuberculosis based on exudative and lymphocytic pleural effusions, and for discriminating the cases most likely to be malignant. Additionally, ML was more accurate than the Bayesian approach in our study.

1 January 2017 in Cancer Biology & Medicine
Verified
Journal Article
Open access
PDF file
Jon ZabaletaJon Zabaleta
Jon Zabaleta
BABorja Aguinagalde
Borja Aguinagalde
ILIker Lopez
Iker Lopez
AFArantza Fernandez-Monge
Arantza Fernandez-Monge
JIJose M. Izquierdo
Jose M. Izquierdo
JEJose I. Emparanza
Jose I. Emparanza
Objective: To assess the impact of past liver metastases on the survival duration of patients who are undergoing surgery for lungmetastases. Methods: We conducted a review of literature published from 2007 to 2014. The studies were identified by searching PubMed,MEDLINE, and Embase and were supplemented by a manual search of the references listed by the retrieved studies. The followingsearch terms were used: lung metastasectomy, pulmonary metastasectomy, lung metastases, and lung metastasis. We selectedretrospective and prospective studies published from 2007 to 2014 on patients with lung metastases from colorectal cancer andwere undergoing surgery with curative intent. We excluded reviews, studies that focused on surgical techniques, patients who weretreated non-surgically, analyses of specific subgroups of patients, and those that did not report follow-up of the patientsundergoing surgery. Results: We identified 28 papers that assessed survival after lung metastases, 21 of which were mostly retrospective studies thatidentified previous liver metastases to explore their impact on patient survival. In more than half of the papers analyzed (63.2%),patients with a history of resected liver metastases had a lower survival rate than those who did not have such a history, and thedifference was statistically significant in eight of these studies. However, data were presented differently, and authors reportedmean survival time, survival rates, or hazard ratios. Conclusions: A history of liver metastases seems to be a negative prognostic factor, but the individual data need to undergo ameta-analysis.