Yuji Nagashima

Prof. Yuji Nagashima


Research Focus & Metrics

Academic Career Length

22Years (2005-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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28 November 2006 in The FEBS Journal
Verified
Journal Article
Open access
PDF file
YKYoichiro Kitani
Yoichiro Kitani
CTChihiro Tsukamoto
Chihiro Tsukamoto
GZGuoHua Zhang
GuoHua Zhang
HNHiroshi Nagai
Hiroshi Nagai
MIMasami Ishida
Masami Ishida
YNYuji Nagashima
Yuji Nagashima
Fish skin mucus contains a variety of antimicrobial proteins and peptides that seem to play a role in self defense. We previously reported an antibacterial protein in the skin secretion of the rockfish, Sebastes schlegeli, which showed selective antibacterial activity against Gram‐negative bacteria. This study aimed to isolate and structurally and functionally characterize this protein. The antibacterial protein, termed SSAP (S. schlegeli antibacterial protein), was purified to homogeneity by lectin affinity column chromatography, anion‐exchange HPLC and hydroxyapatite HPLC. It was found to be a glycoprotein containing N‐linked glycochains and FAD. Its molecular mass was estimated to be 120 kDa by gel filtration HPLC and 53 kDa by SDS/PAGE, suggesting that it is a homodimer. On the basis of the partial amino‐acid sequence determined, a full‐length cDNA of 2037 bp including an ORF of 1662 bp that encodes 554 amino‐acid residues was cloned by 3′ RACE, 5′ RACE and RT‐PCR. A blast search showed that a mature protein (496 residues) is homologous to l‐amino acid oxidase (LAO) family proteins. SSAP was determined to have LAO activity by the H2O2‐generation assay and substrate specificity for only l‐Lys with a Km of 0.19 mm. It showed potent antibacterial activity against fish pathogens such as Aeromonas hydrophila, Aeromonas salmonicida and Photobacterium damselae ssp. piscicida. The antibacterial activity was completely lost on the addition of catalase, confirming that H2O2 is responsible for the growth inhibition. This study identifies SSAP as a new member of the LAO family and reveals LAO involvement in the innate immunity of fish skin.

1 December 2005 in Toxicon
Verified
Journal Article
Closed access
THTomohiro Honma
Tomohiro Honma
SMSonomi Minagawa
Sonomi Minagawa
HNHiroshi Nagai
Hiroshi Nagai
MIMasami Ishida
Masami Ishida
YNYuji Nagashima
Yuji Nagashima
KSKazuo Shiomi
Kazuo Shiomi

1 September 2009 in Comparative Biochemistry and Physiology Part B: Biochemistry and Molecular Biology
Verified
Journal Article
Closed access
YNYuji Nagashima
Yuji Nagashima
CTChihiro Tsukamoto
Chihiro Tsukamoto
YKYoichiro Kitani
Yoichiro Kitani
SIShoichiro Ishizaki
Shoichiro Ishizaki
HNHiroshi Nagai
Hiroshi Nagai
TYTakashi Yanagimoto
Takashi Yanagimoto

17 June 2008 in Toxicon
Verified
Journal Article
Closed access
TMTakuya Matsumoto
Takuya Matsumoto
YNYuji Nagashima
Yuji Nagashima
HKHiroyuki Kusuhara
Hiroyuki Kusuhara
SIShoichiro Ishizaki
Shoichiro Ishizaki
KSKuniyoshi Shimakura
Kuniyoshi Shimakura
KSKazuo Shiomi
Kazuo Shiomi

1 September 2017 in Toxicon
Verified
Journal Article
Closed access
XYXianzhe Yin
Xianzhe Yin
AKAya Kiriake
Aya Kiriake
AOAkira Ohta
Akira Ohta
YKYoichiro Kitani
Yoichiro Kitani
SIShoichiro Ishizaki
Shoichiro Ishizaki
YNYuji Nagashima
Yuji Nagashima

2 December 2010 in Marine Drugs
Verified
Journal Article
Open access
PDF file
YYYoshikazu Yamaguchi
Yoshikazu Yamaguchi
YHYuichi Hasegawa
Yuichi Hasegawa
THTomohiro Honma
Tomohiro Honma
YNYuji Nagashima
Yuji Nagashima
KSKazuo Shiomi
Kazuo Shiomi
When 21 species of sea anemones were screened for Kv1 potassium channel toxins by competitive inhibition of the binding of 125I-α-dendrotoxin to rat synaptosomal membranes, 11 species (two species of Actiniidae, one species of Hormathiidae, five species of Stichodactylidae and three species of Thalassianthidae) were found to be positive. Furthermore, full-length cDNAs encoding type 1 potassium channel toxins from three species of Stichodactylidae and three species of Thalassianthidae were cloned by a combination of RT-PCR, 3′RACE and 5′RACE. The precursors of these six toxins are commonly composed of signal peptide, propart and mature peptide portions. As for the mature peptide (35 amino acid residues), the six toxins share more than 90% sequence identities with one another and with κ1.3-SHTX-She1a (Shk) from Stichodactyla helianthus but only 34–63% identities with the other type 1 potassium channel toxins.