Xinyi Zan

Xinyi Zan

orcid

Research Focus & Metrics

Academic Career Length

11Years (2016-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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11 February 2016 in Microbial Cell Factories
Verified
Journal Article
Open access
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XTXin Tang
Xin Tang
XZXinyi Zan
Xinyi Zan
LZLina Zhao
Lina Zhao
HCHaiqin Chen
Haiqin Chen
YCYongquan Chen
Yongquan Chen
CRColin Ratledge
Colin Ratledge
The oleaginous fungus, Mucor circinelloides, is attracting considerable interest as it produces oil rich in γ-linolenic acid. Nitrogen (N) deficiency is a common strategy to trigger the lipid accumulation in oleaginous microorganisms. Although a simple pathway from N depletion in the medium to lipid accumulation has been elucidated at the enzymatic level, global changes at protein levels upon N depletion have not been investigated. In this study, we have systematically analyzed the changes at the levels of protein expression in M. circinelloides WJ11, a high lipid-producing strain (36 %, lipid/cell dry weight), during lipid accumulation. Proteomic analysis demonstrated that N depletion increased the expression of glutamine synthetase, involved in ammonia assimilation, for the supply of cellular nitrogen but decreased the metabolism of amino acids. Upon N deficiency, many proteins (e.g., fructose-bisphosphate aldolase, glyceraldehyde-3-phosphate dehydrogenase, enolase, pyruvate kinase) involved in glycolytic pathway were up-regulated while proteins involved in the tricarboxylic acid cycle (e.g., isocitrate dehydrogenase, succinyl-CoA ligase, succinate dehydrogenase, fumarate hydratase) were down-regulated, indicating this activity was retarded thereby leading to a greater flux of carbon into fatty acid biosynthesis. Moreover, glucose-6-phosphate dehydrogenase, transaldolase and transketolase, which participate in the pentose phosphate pathway, were up-regulated, leading to the increased production of NADPH, the reducing power for fatty acid biosynthesis. Furthermore, protein and nucleic acid metabolism were down-regulated and some proteins involved in energy metabolism, signal transduction, molecular chaperone and redox homeostasis were up-regulated upon N depletion, which may be the cellular response to the stress produced by the onset of N deficiency. N limitation increased those expressions of the proteins involved in ammonia assimilation but decreased that involved in the biosynthesis of amino acids. Upon N deprivation, the glycolytic pathway was up-regulated, while the activity of the tricarboxylic acid cycle was retarded, thus, leading more carbon flux to fatty acid biosynthesis. Moreover, the pentose phosphate pathway was up-regulated, then this would increase the production of NADPH. Together, coordinated regulation of central carbon metabolism upon N limitation, provides more carbon flux to acetyl-CoA and NADPH for fatty acid biosynthesis.

3 March 2020 in Applied Biochemistry and Biotechnology
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Journal Article
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BNBelinda Amanda Nyabako
Belinda Amanda Nyabako
HFHua Fang
Hua Fang
Fengjie CuiFengjie Cui
Fengjie Cui
KLKaiYue Liu
KaiYue Liu
TTTingLei Tao
TingLei Tao
WSWenJing Sun
WenJing Sun

10 February 2023 in Fermentation
Verified
Journal Article
Open access
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YYYumeng Yang
Yumeng Yang
YLYingying Liang
Yingying Liang
Fengjie CuiFengjie Cui
Fengjie Cui
YWYongli Wang
Yongli Wang
LSLei Sun
Lei Sun
WSWenJing Sun
WenJing Sun
UDP-glycosyltransferases (UGTs) are the most studied glycosyltransferases, and belong to large GT1 family performing the key roles in antibiotic synthesis, the development of bacterial glycosyltransferase inhibitors, and in animal inflammation. They transfer the glycosyl groups from nucleotide UDP-sugars (UDP-glucose, UDP-galactose, UDP-xylose, and UDP-rhamnose) to the acceptors including saccharides, proteins, lipids, and secondary metabolites. The present review summarized the recent of UDP-glycosyltransferases, including their structures, functions, and catalytic mechanism, especially in edible fungi. The future perspectives and new challenges were also summarized to understand of their structure–function relationships in the future. The outputs in this field could provide a reference to recognize function, structure, and catalytic mechanism of UDP-glycosyltransferases for understanding the biosynthesis pathways of secondary metabolites, such as hydrocarbons, monoterpenes, sesquiterpene, and polysaccharides in edible fungi.

8 March 2016 in Biotechnology Letters
Verified
Journal Article
Closed access
PDF file
LHLuxuan Huang
Luxuan Huang
LZLina Zhao
Lina Zhao
XZXinyi Zan
Xinyi Zan
YSYuanda Song
Yuanda Song
CRColin Ratledge
Colin Ratledge

23 April 2024 in Journal of Agricultural and Food Chemistry
Verified
Journal Article
Closed access
XZXinyi Zan
Xinyi Zan
YYYing Yan
Ying Yan
GCGege Chen
Gege Chen
LSLei Sun
Lei Sun
LWLinhan Wang
Linhan Wang
Fengjie CuiFengjie Cui
Fengjie Cui

25 June 2025 in Journal of Agricultural and Food Chemistry
Verified
Journal Article
Closed access
XZXinyi Zan
Xinyi Zan
ALAo Li
Ao Li
YXYunting Xu
Yunting Xu
QMQiqi Meng
Qiqi Meng
TLTao Luo
Tao Luo
Fengjie CuiFengjie Cui
Fengjie Cui