Fei Tan

Dr. Fei Tan

orcid

Research Focus & Metrics

Academic Career Length

5Years (2022-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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1 January 2024
Verified
Conference Paper
Open access
PDF file
HZHengyuan Zhang
Hengyuan Zhang
YWYanru Wu
Yanru Wu
DLDawei Li
Dawei Li
SYSak Yang
Sak Yang
RZRui Zhao
Rui Zhao
FTFei Tan
Fei Tan
Hengyuan Zhang, Yanru Wu, Dawei Li, Sak Yang, Rui Zhao, Yong Jiang, Fei Tan. Findings of the Association for Computational Linguistics ACL 2024. 2024.

18 June 2023 in Magnetic Resonance in Medicine
Verified
Journal Article
Closed access
KWKe Wang
Ke Wang
MDMariya Doneva
Mariya Doneva
JMJakob Meineke
Jakob Meineke
TAThomas Amthor
Thomas Amthor
EKEkin Karasan
Ekin Karasan
MLMichael Lustig
Michael Lustig

9 May 2023 in Magnetic Resonance in Medicine
Verified
Journal Article
Closed access
FTFei Tan
Fei Tan
XZXucheng Zhu
Xucheng Zhu
MCMarilynn Chan
Marilynn Chan
MZMatthew A. Zapala
Matthew A. Zapala
SVShreyas S. Vasanawala
Shreyas S. Vasanawala
PLPeder Larson
Peder Larson

26 June 2023 in Proceedings of the AAAI Conference on Artificial Intelligence
Verified
Journal Article
Open access
PDF file
JLJinghui Lu
Jinghui Lu
RZRui Zhao
Rui Zhao
BNBrian Mac Namee
Brian Mac Namee
FTFei Tan
Fei Tan
Much of named entity recognition (NER) research focuses on developing dataset-specific models based on data from the domain of interest, and a limited set of related entity types. This is frustrating as each new dataset requires a new model to be trained and stored. In this work, we present a ``versatile'' model---the Prompting-based Unified NER system (PUnifiedNER)---that works with data from different domains and can recognise up to 37 entity types simultaneously, and theoretically it could be as many as possible. By using prompt learning, PUnifiedNER is a novel approach that is able to jointly train across multiple corpora, implementing intelligent on-demand entity recognition. Experimental results show that PUnifiedNER leads to significant prediction benefits compared to dataset-specific models with impressively reduced model deployment costs. Furthermore, the performance of PUnifiedNER can achieve competitive or even better performance than state-of-the-art domain-specific methods for some datasets. We also perform comprehensive pilot and ablation studies to support in-depth analysis of each component in PUnifiedNER.

15 June 2024 in Bioengineering
Verified
Journal Article
Open access
PDF file
FTFei Tan
Fei Tan
JDJana Delfino
Jana Delfino
RZRongping Zeng
Rongping Zeng
Quantitative and objective evaluation tools are essential for assessing the performance of machine learning (ML)-based magnetic resonance imaging (MRI) reconstruction methods. However, the commonly used fidelity metrics, such as mean squared error (MSE), structural similarity (SSIM), and peak signal-to-noise ratio (PSNR), often fail to capture fundamental and clinically relevant MR image quality aspects. To address this, we propose evaluation of ML-based MRI reconstruction using digital image quality phantoms and automated evaluation methods. Our phantoms are based upon the American College of Radiology (ACR) large physical phantom but created in k-space to simulate their MR images, and they can vary in object size, signal-to-noise ratio, resolution, and image contrast. Our evaluation pipeline incorporates evaluation metrics of geometric accuracy, intensity uniformity, percentage ghosting, sharpness, signal-to-noise ratio, resolution, and low-contrast detectability. We demonstrate the utility of our proposed pipeline by assessing an example ML-based reconstruction model across various training and testing scenarios. The performance results indicate that training data acquired with a lower undersampling factor and coils of larger anatomical coverage yield a better performing model. The comprehensive and standardized pipeline introduced in this study can help to facilitate a better understanding of the performance and guide future development and advancement of ML-based reconstruction algorithms.

15 April 2025 in NMR in Biomedicine
Verified
Journal Article
Closed access
FTFei Tan
Fei Tan
RERachel L. Eddy
Rachel L. Eddy
VDVanessa M. Diamond
Vanessa M. Diamond
JRJonathan H. Rayment
Jonathan H. Rayment
PLPeder Larson
Peder Larson