Felice Burn

Dr. Felice Burn

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Research Focus & Metrics

Academic Career Length

5Years (2022-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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9 October 2024 in Investigative Radiology
Verified
Journal Article
Closed access
VGVera Inka Josephin Graeve
Vera Inka Josephin Graeve
SLSimin Laures
Simin Laures
ASAndres Spirig
Andres Spirig
HZHasan Zaytoun
Hasan Zaytoun
CGClaudia Gregoriano
Claudia Gregoriano
TSTician Schnitzler
Tician Schnitzler
Objectives: A substantial number of incidental pulmonary embolisms (iPEs) in computed tomography scans are missed by radiologists in their daily routine. This study analyzes the radiological reports of iPE cases before and after implementation of an artificial intelligence (AI) algorithm for iPE detection. Furthermore, we investigate the anatomic distribution patterns within missed iPE cases and mortality within a 90-day follow-up in patients before and after AI use. Materials and Methods: This institutional review board–approved observational single-center study included 5298 chest computed tomography scans performed for reasons other than suspected pulmonary embolism (PE). We compared 2 cohorts: cohort 1, consisting of 1964 patients whose original radiology reports were generated before the implementation of an AI algorithm, and cohort 2, consisting of 3334 patients whose scans were analyzed after the implementation of an Food and Drug Administration–approved and CE-certified AI algorithm for iPE detection (Aidoc Medical, Tel Aviv, Israel). For both cohorts, any discrepancies between the original radiology reports and the AI results were reviewed by 2 thoracic imaging subspecialized radiologists. In the original radiology report and in case of discrepancies with the AI algorithm, the expert review served as reference standard. Sensitivity, specificity, prevalence, negative predictive value (NPV), and positive predictive value (PPV) were calculated. The rates of missed iPEs in both cohorts were compared statistically using STATA (Version 17.1). Kaplan-Meier curves and Cox proportional hazards models were used for survival analysis. Results: In cohort 1 (mean age 70.6 years, 48% female [n = 944], 52% male [n = 1020]), the prevalence of confirmed iPE was 2.2% (n = 42), and the AI detected 61 suspicious iPEs, resulting in a sensitivity of 95%, a specificity of 99%, a PPV of 69%, and an NPV of 99%. Radiologists missed 50% of iPE cases in cohort 1. In cohort 2 (mean age 69 years, 47% female [n = 1567], 53% male [n = 1767]), the prevalence of confirmed iPEs was 1.7% (56/3334), with AI detecting 59 suspicious cases (sensitivity 90%, specificity 99%, PPV 95%, NPV 99%). The rate of missed iPEs by radiologists dropped to 7.1% after AI implementation, showing a significant improvement (P < 0.001). Most overlooked iPEs (61%) were in the right lower lobe. The survival analysis showed no significantly decreased 90-day mortality rate, with a hazards ratio of 0.95 (95% confidence interval, 0.45–1.96; P = 0.88). Conclusions: The implementation of an AI algorithm significantly reduced the rate of missed iPEs from 50% to 7.1%, thereby enhancing diagnostic accuracy. Despite this improvement, the 90-day mortality rate remained unchanged. These findings highlight the AI tool's potential to assist radiologists in accurately identifying iPEs, although its implementation does not significantly affect short-term survival. Notably, most missed iPEs were located in the right lower lobe, suggesting that radiologists should pay particular attention to this area during evaluations.

2 August 2024 in Diagnostics
Verified
Journal Article
Open access
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MRMalte Rippa
Malte Rippa
RSRuben Schulze
Ruben Schulze
GKGeorgia Kenyon
Georgia Kenyon
MHMarian Himstedt
Marian Himstedt
MKMaciej Kwiatkowski
Maciej Kwiatkowski
FBFelice Burn
Felice Burn
In this work, several machine learning (ML) algorithms, both classical ML and modern deep learning, were investigated for their ability to improve the performance of a pipeline for the segmentation and classification of prostate lesions using MRI data. The algorithms were used to perform a binary classification of benign and malignant tissue visible in MRI sequences. The model choices include support vector machines (SVMs), random decision forests (RDFs), and multi-layer perceptrons (MLPs), along with radiomic features that are reduced by applying PCA or mRMR feature selection. Modern CNN-based architectures, such as ConvNeXt, ConvNet, and ResNet, were also evaluated in various setups, including transfer learning. To optimize the performance, different approaches were compared and applied to whole images, as well as gland, peripheral zone (PZ), and lesion segmentations. The contribution of this study is an investigation of several ML approaches regarding their performance in prostate cancer (PCa) diagnosis algorithms. This work delivers insights into the applicability of different approaches for this context based on an exhaustive examination. The outcome is a recommendation or preference for which machine learning model or family of models is best suited to optimize an existing pipeline when the model is applied as an upstream filter.

19 August 2022 in Journal of Imaging
Verified
Journal Article
Open access
PDF file
Pascal SagerPascal Sager
Pascal Sager
SSSebastian Salzmann
Sebastian Salzmann
FBFelice Burn
Felice Burn
Thilo StadelmannThilo Stadelmann
Thilo Stadelmann
A variety of medical computer vision applications analyze 2D slices of computed tomography (CT) scans, whereas axial slices from the body trunk region are usually identified based on their relative position to the spine. A limitation of such systems is that either the correct slices must be extracted manually or labels of the vertebrae are required for each CT scan to develop an automated extraction system. In this paper, we propose an unsupervised domain adaptation (UDA) approach for vertebrae detection and identification based on a novel Domain Sanity Loss (DSL) function. With UDA the model’s knowledge learned on a publicly available (source) data set can be transferred to the target domain without using target labels, where the target domain is defined by the specific setup (CT modality, study protocols, applied pre- and processing) at the point of use (e.g., a specific clinic with its specific CT study protocols). With our approach, a model is trained on the source and target data set in parallel. The model optimizes a supervised loss for labeled samples from the source domain and the DSL loss function based on domain-specific “sanity checks” for samples from the unlabeled target domain. Without using labels from the target domain, we are able to identify vertebra centroids with an accuracy of 72.8%. By adding only ten target labels during training the accuracy increases to 89.2%, which is on par with the current state-of-the-art for full supervised learning, while using about 20 times less labels. Thus, our model can be used to extract 2D slices from 3D CT scans on arbitrary data sets fully automatically without requiring an extensive labeling effort, contributing to the clinical adoption of medical imaging by hospitals.

5 February 2023 in Nutrients
Verified
Journal Article
Open access
PDF file
LMLeonie Müller
Leonie Müller
NMNicole Mentil
Nicole Mentil
NSNathalie Staub
Nathalie Staub
SGStephanie Griot
Stephanie Griot
TOTobias Olpe
Tobias Olpe
ABAnnic Baumgartner
Annic Baumgartner
Background: Measurement of skeletal muscle index (SMI) in computed tomography has been suggested to improve the objective assessment of muscle mass. While most studies have focused on lumbar vertebrae, we examine the association of SMI at the thoracic level with nutritional and clinical outcomes and response to nutritional intervention. Methods: We conducted a secondary analysis of EFFORT, a Swiss-wide, multicenter, randomized trial. We investigated the association of low SMI at the 12th thoracic vertebra (T12) with adverse outcome within 30 days after hospital admission (primary endpoint). Results: 663 of 2028 patients from the EFFORT trial had available CT scans for T12, and 519 among them also had available L3 scans. Mean SMI at T12 was 22.4 ± 5.8 cm2/m2 and 19.6 ± 5.5 cm2/m2 in male and female patients, respectively, and correlated well with nutritional parameters, including nutritional risk based on NRS 2002 (adjusted coefficient −0.63, 95%CI −1.25 to −0.01, p = 0.047), BMI (adjusted coefficient 0.74, 95%CI 0.66 to 0.82, p < 0.001) and handgrip strength (adjusted coefficient 0.15, 95%CI 0.11 to 0.2, p < 0.001). In multivariate regression analyses, low SMI was not a significant predictor for either clinical outcome or for treatment response. Results for SMI measured at L3 were similar, with only little prognostic value. Conclusions: Within medical patients at risk for malnutrition, SMI at thoracic vertebra provided low prognostic information regarding clinical outcomes and nutritional treatment response.

5 June 2026 in JMIR AI
Verified
Journal Article
Open access
MGMateusz Gładysz
Mateusz Gładysz
FFFabrizio Fiumedinisi
Fabrizio Fiumedinisi
FBFelice Burn
Felice Burn
NRNikki Rommers
Nikki Rommers
PGPietro Giovanoli
Pietro Giovanoli
JPJan Alexander Plock
Jan Alexander Plock
Background: Medical documentation imposes a significant administrative burden on physicians and reduces time for direct patient care. Artificial intelligence (AI)-assisted tools such as automatic speech recognition and large language models (LLMs) promise to reduce this burden, but their performance in multilingual environments has not been explored. Switzerland is highly multilingual, and non-native German-speaking physicians may find documentation particularly challenging. Objective: This study aimed to compare the efficiency and documentation quality of four clinical documentation workflows—including both AI-assisted and traditional methods—in a Swiss tertiary hospital setting characterized by linguistic diversity. Methods: In this proof-of-concept study at a Swiss tertiary hospital (Department of Plastic and Hand Surgery, Cantonal Hospital Aarau), two physicians—a native Swiss German speaker and a non-native German speaker—documented encounters with simulated patients having common hand disorders. Four documentation workflows were tested: (1) traditional dictation with transcription by a secretary; (2) real-time dictation using speech recognition software for voice to text transcription; (3) postencounter dictation transcribed by an AI (Whisper) and processed by a GPT-based agent; and (4) AI-assisted ambient dictation of entire appointments using audio recording and automatic transcription. Documentation efficiency was measured by recorded physician time, and note quality was assessed using a modified Physician Documentation Quality Instrument (PDQI-9) scored by three different LLMs. To protect patient privacy, only synthetic (simulated) patient data were used. Results: AI-assisted workflows—particularly workflow 4 (AI-assisted ambient dictation)—produced the shortest physician documentation times per report. In post-hoc comparisons, workflow 4 was significantly faster than solely the speech recognition software workflow (workflow 2) for both physicians (adjusted P <.001). For the non-native speaker, workflow 4 was not significantly faster than traditional dictation (workflow 1) after adjustment ( P =.08). LLM evaluators assigned high absolute scores (median PDQI-9 >47/50); however, inter-rater reliability was poor (Krippendorff’s alpha=−.433, 95% CI: −0.444 to −0.416), indicating systematic disagreement that precludes definitive conclusions about documentation quality from these scores alone. Conclusions: AI-assisted documentation demonstrated significant time savings for the native speaker, though the reduction for the non-native speaker did not reach statistical significance in this pilot ( P =.08). Such tools show potential to alleviate the linguistic challenges faced by non-native speakers, reduce administrative burdens, and enable physicians to spend more time with patients. However, the inconsistency of AI-based quality scoring suggests that LLMs cannot yet reliably replace human evaluation. Future studies should evaluate these workflows in real-world clinical implementation, address data privacy and security issues, and include human evaluators to validate the benefits observed in this study.

19 September 2022 in Advances in Therapy
Verified
Journal Article
Open access
PDF file
CEChristian V. Eisenring
Christian V. Eisenring
PHPreci L. Hamilton
Preci L. Hamilton
PHPhilippe Herzog
Philippe Herzog
MOMarkus F. Oertel
Markus F. Oertel
IJIsabelle Jacot-Sadowski
Isabelle Jacot-Sadowski
DNDavid Nanchen
David Nanchen
Introduction Smoking prevalence is twice as high among patients admitted to hospital because of the acute condition of aneurysmal subarachnoid hemorrhage (aSAH) as in the general population. Smoking cessation may improve the prognosis of aSAH, but nicotine replacement therapy (NRT) administered at the time of aSAH remains controversial because of potential adverse effects such as cerebral vasospasm. We investigated the international practice of NRT use for aSAH among neurosurgeons. Methods The online SurveyMonkey software was used to administer a 15-question, 5-min online questionnaire. An invitation link was sent to those 1425 of 1988 members of the European Association of Neurosurgical Societies (EANS) who agreed to participate in surveys to assess treatment strategies for withdrawal of tobacco smoking during aSAH. Factors contributing to physicians’ posture towards NRT were assessed. Results A total of 158 physicians from 50 nations participated in the survey (response rate 11.1%); 68.4% (108) were affiliated with university hospitals and 67.7% (107) practiced at high-volume neurovascular centers with at least 30 treated aSAH cases per year. Overall, 55.7% (88) of physicians offered NRT to smokers with aSAH, 22.1% (35) offered non-NRT support including non-nicotine medication and counselling, while the remaining 22.1% (35) did not actively support smoking cessation. When smoking was not possible, 42.4% (67) of physicians expected better clinical outcomes when prescribing NRT instead of nicotine deprivation, 36.1% (57) were uncertain, 13.9% (22) assumed unaffected outcomes, and 7.6% (12) assumed worse outcomes. Only 22.8% (36) physicians had access to a local smoking cessation team in their practice, of whom half expected better outcomes with NRT as compared to deprivation. Conclusions A small majority of the surveyed physicians of the EANS offered NRT to support smoking cessation in hospitalized patients with aSAH. However, less than half believed that NRT could positively impact clinical outcome as compared to deprivation. This survey demonstrated the lack of consensus regarding use of NRT for hospitalized smokers with aSAH.