Débora de Oliveira Lopes

Dr. Débora de Oliveira Lopes


Research Focus & Metrics

Academic Career Length

24Years (2003-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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2 March 2021 in Frontiers in Immunology
Verified
Journal Article
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RSRodrigo C. O. Sanches
Rodrigo C. O. Sanches
STSandeep Tiwari
Sandeep Tiwari
LFLaís C. G. Ferreira
Laís C. G. Ferreira
FOFlávio M. Oliveira
Flávio M. Oliveira
MLMarcelo D. Lopes
Marcelo D. Lopes
DLDébora de Oliveira Lopes
Débora de Oliveira Lopes
Schistosomiasis remains a serious health issue nowadays for an estimated one billion people in 79 countries around the world. Great efforts have been made to identify good vaccine candidates during the last decades, but only three molecules reached clinical trials so far. The reverse vaccinology approach has become an attractive option for vaccine design, especially regarding parasites likeSchistosomaspp. that present limitations for culture maintenance. This strategy also has prompted the construction of multi-epitope based vaccines, with great immunological foreseen properties as well as being less prone to contamination, autoimmunity, and allergenic responses. Therefore, in this study we applied a robust immunoinformatics approach, targetingS. mansonitransmembrane proteins, in order to construct a chimeric antigen. Initially, the search for all hypothetical transmembrane proteins in GeneDB provided a total of 584 sequences. Using the PSORT II and CCTOP servers we reduced this to 37 plasma membrane proteins, from which extracellular domains were used for epitope prediction. Nineteen common MHC-I and MHC-II binding epitopes, from eight proteins, comprised the final multi-epitope construct, along with suitable adjuvants. The final chimeric multi-epitope vaccine was predicted as prone to induce B-cell and IFN-γ based immunity, as well as presented itself as stable and non-allergenic molecule. Finally, molecular docking and molecular dynamics foresee stable interactions between the putative antigen and the immune receptor TLR 4. Our results indicate that the multi-epitope vaccine might stimulate humoral and cellular immune responses and could be a potential vaccine candidate against schistosomiasis.

18 April 2011 in PLOS ONE
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Journal Article
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JRJerônimo C. Ruiz
Jerônimo C. Ruiz
VDVívian D'AFonseca
Vívian D'AFonseca
ASArtur Silva
Artur Silva
Amjad AliAmjad Ali
Amjad Ali
APAnne C. Pinto
Anne C. Pinto
Vasco AzevedoVasco Azevedo
Vasco Azevedo
Corynebacterium pseudotuberculosis, a Gram-positive, facultative intracellular pathogen, is the etiologic agent of the disease known as caseous lymphadenitis (CL). CL mainly affects small ruminants, such as goats and sheep; it also causes infections in humans, though rarely. This species is distributed worldwide, but it has the most serious economic impact in Oceania, Africa and South America. Although C. pseudotuberculosis causes major health and productivity problems for livestock, little is known about the molecular basis of its pathogenicity. We characterized two C. pseudotuberculosis genomes (Cp1002, isolated from goats; and CpC231, isolated from sheep). Analysis of the predicted genomes showed high similarity in genomic architecture, gene content and genetic order. When C. pseudotuberculosis was compared with other Corynebacterium species, it became evident that this pathogenic species has lost numerous genes, resulting in one of the smallest genomes in the genus. Other differences that could be part of the adaptation to pathogenicity include a lower GC content, of about 52%, and a reduced gene repertoire. The C. pseudotuberculosis genome also includes seven putative pathogenicity islands, which contain several classical virulence factors, including genes for fimbrial subunits, adhesion factors, iron uptake and secreted toxins. Additionally, all of the virulence factors in the islands have characteristics that indicate horizontal transfer. These particular genome characteristics of C. pseudotuberculosis, as well as its acquired virulence factors in pathogenicity islands, provide evidence of its lifestyle and of the pathogenicity pathways used by this pathogen in the infection process. All genomes cited in this study are available in the NCBI Genbank database (http://www.ncbi.nlm.nih.gov/genbank/) under accession numbers CP001809 and CP001829.

1 August 2011 in Gene
Verified
Journal Article
Closed access
BRB.C. Resende
B.C. Resende
ARA.B. Rebelato
A.B. Rebelato
VDV. D'Afonseca
V. D'Afonseca
Anderson Rodrigues dos SantosAnderson Rodrigues dos Santos
Anderson Rodrigues dos Santos
TST. Stutzman
T. Stutzman
DLDébora de Oliveira Lopes
Débora de Oliveira Lopes

1 November 2008 in DNA Repair
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Journal Article
Closed access
DLDébora de Oliveira Lopes
Débora de Oliveira Lopes
BSBruno Luiz Fonseca Schamber-Reis
Bruno Luiz Fonseca Schamber-Reis
CRCarlos Gustavo Regis-Da-Silva
Carlos Gustavo Regis-Da-Silva
MRMatheus Andrade Rajão
Matheus Andrade Rajão
Wanderson Duarte DaRochaWanderson Duarte DaRocha
Wanderson Duarte DaRocha
CMCarlos Renato Machado
Carlos Renato Machado

1 March 2019 in Journal of Ethnopharmacology
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Journal Article
Closed access
ASAline Aparecida Saldanha
Aline Aparecida Saldanha
LVLetícia Vieira
Letícia Vieira
RRosy Iara Ribeiro
Rosy Iara Ribeiro
RTRalph Gruppi Thomé
Ralph Gruppi Thomé
HSHélio Batista dos Santos
Hélio Batista dos Santos
ASAdriana Cristina Soares
Adriana Cristina Soares

11 December 2018 in Breast Cancer
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Journal Article
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NCNilson Moreira Cipriano
Nilson Moreira Cipriano
ABAmanda Marques de Brito
Amanda Marques de Brito
EOEneida Santos de Oliveira
Eneida Santos de Oliveira
FFFabiana Castro de Faria
Fabiana Castro de Faria
SLSara Lemos
Sara Lemos
LSLuciana Lara dos Santos
Luciana Lara dos Santos