Khalid Amari

Dr. Khalid Amari

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Research Focus & Metrics

Academic Career Length

26Years (2001-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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23 September 2010 in PLOS Pathogens
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KAKhalid Amari
Khalid Amari
EBEmmanuel Boutant
Emmanuel Boutant
CHChristina Hofmann
Christina Hofmann
Corinne KeichingerCorinne Keichinger
Corinne Keichinger
LFLourdes Fernandez-Calvino
Lourdes Fernandez-Calvino
Christophe RitzenthalerChristophe Ritzenthaler
Christophe Ritzenthaler
Plasmodesmata (PD) are essential but poorly understood structures in plant cell walls that provide symplastic continuity and intercellular communication pathways between adjacent cells and thus play fundamental roles in development and pathogenesis. Viruses encode movement proteins (MPs) that modify these tightly regulated pores to facilitate their spread from cell to cell. The most striking of these modifications is observed for groups of viruses whose MPs form tubules that assemble in PDs and through which virions are transported to neighbouring cells. The nature of the molecular interactions between viral MPs and PD components and their role in viral movement has remained essentially unknown. Here, we show that the family of PD-located proteins (PDLPs) promotes the movement of viruses that use tubule-guided movement by interacting redundantly with tubule-forming MPs within PDs. Genetic disruption of this interaction leads to reduced tubule formation, delayed infection and attenuated symptoms. Our results implicate PDLPs as PD proteins with receptor-like properties involved the assembly of viral MPs into tubules to promote viral movement. In plants, spreading virus infection occurs via small pores in the cell wall named plasmodesmata that connect adjacent cells. Two decades have passed since the first discovery of specific viral proteins (movement proteins; MP) that assist this process. However, the manner by which these proteins adapt plasmodesmata to allow the movement of relatively large viral structures remains largely unknown. Here, we show that a family of plasmodesmata-located proteins, called PDLPs, which are conserved amongst higher plants, specifically mediate this process. PDLPs bind classes of MP that assemble into tubules within plasmodesmata to promote the movement of entire virions. This class of MP occurs for a diverse range of plant virus genera and we show that representatives of these viruses have MPs that bind PDLPs. The importance of PDLPs in this process was shown when reduction in accumulation led to reduced tubule formation, delayed infection and attenuated symptoms. Altogether, our study supports a scenario whereby the PDLPs work together to support virus infection of plants and as such provide important mechanistic insights into the movement mechanism of plant viruses within their hosts.

12 October 2010 in Protoplasma
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JTJens Tilsner
Jens Tilsner
KAKhalid Amari
Khalid Amari
LTLesley Torrance
Lesley Torrance

1 December 2012 in Phytopathology®
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Journal Article
Open access
Vicente PallásVicente Pallás
Vicente Pallás
Frederic AparicioFrederic Aparicio
Frederic Aparicio
MHM. C. Herranz
M. C. Herranz
KAKhalid Amari
Khalid Amari
MPMaria Amelia PINA
Maria Amelia PINA
JSJesus Sanchez-Navarro
Jesus Sanchez-Navarro
Prunus spp. are affected by a large number of viruses, causing significant economic losses through either direct or indirect damage, which results in reduced yield and fruit quality. Among these viruses, members of the genus Ilarvirus (isometric labile ringspot viruses) occupy a significant position due to their distribution worldwide. Although symptoms caused by these types of viruses were reported early in the last century, their molecular characterization was not achieved until the 1990s, much later than for other agronomically relevant viruses. This was mainly due to the characteristic liability of virus particles in tissue extracts. In addition, ilarviruses, together with Alfalfa mosaic virus, are unique among plant viruses in that they require a few molecules of the coat protein in the inoculum in order to be infectious, a phenomenon known as genome activation. Another factor that has made the study of this group of viruses difficult is that infectious clones have been obtained only for the type member of the genus, Tobacco streak virus. Four ilarviruses, Prunus necrotic ringspot virus, Prune dwarf virus, Apple mosaic virus, and American plum line pattern virus, are pathogens of the main cultivated fruit trees. As stated in the 9th Report of the International Committee on Taxonomy of Viruses, virions of this genus are “unpromising subjects for the raising of good antisera.” With the advent of molecular approaches for their detection and characterization, it has been possible to get a more precise view of their prevalence and genome organization. This review updates our knowledge on the incidence, genome organization and expression, genetic diversity, modes of transmission, and diagnosis, as well as control of this peculiar group of viruses affecting fruit trees.

27 October 2011 in PLOS Pathogens
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KAKhalid Amari
Khalid Amari
ALAlexander Lerich
Alexander Lerich
Corinne KeichingerCorinne Keichinger
Corinne Keichinger
VDValerian V Dolja
Valerian V Dolja
Christophe RitzenthalerChristophe Ritzenthaler
Christophe Ritzenthaler
Cell-to-cell movement of plant viruses occurs via plasmodesmata (PD), organelles that evolved to facilitate intercellular communications. Viral movement proteins (MP) modify PD to allow passage of the virus particles or nucleoproteins. This passage occurs via several distinct mechanisms one of which is MP-dependent formation of the tubules that traverse PD and provide a conduit for virion translocation. The MP of tubule-forming viruses including Grapevine fanleaf virus (GFLV) recruit the plant PD receptors called Plasmodesmata Located Proteins (PDLP) to mediate tubule assembly and virus movement. Here we show that PDLP1 is transported to PD through a specific route within the secretory pathway in a myosin-dependent manner. This transport relies primarily on the class XI myosins XI-K and XI-2. Inactivation of these myosins using dominant negative inhibition results in mislocalization of PDLP and MP and suppression of GFLV movement. We also found that the proper targeting of specific markers of the Golgi apparatus, the plasma membrane, PD, lipid raft subdomains within the plasma membrane, and the tonoplast was not affected by myosin XI-K inhibition. However, the normal tonoplast dynamics required myosin XI-K activity. These results reveal a new pathway of the myosin-dependent protein trafficking to PD that is hijacked by GFLV to promote tubule-guided transport of this virus between plant cells. To establish infection, plant viruses spread cell-to-cell via narrow channels in the cell wall, the plasmodesmata (PD). Movement proteins (MP) are virus-encoded proteins essential for virus intercellular transport through PD. Plasmodesmata located plant proteins (PDLPs), are specifically recognised by the MPs of tubule-forming viruses. Here we show that PDLP targeting to PD depends on the molecular motors myosin XI-K and XI-2. Consistently, and in support of a function of PDLP as PD receptor for MP, overexpression of dominant negative myosin mutants inhibits tubule formation by Grapevine fanleaf virus (GFLV) MP and dramatically reduces virus movement.

16 October 2014 in PLOS Pathogens
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KAKhalid Amari
Khalid Amari
MDMartin Di Donato
Martin Di Donato
VDValerian V Dolja
Valerian V Dolja
MHManfred Heinlein
Manfred Heinlein
Viruses are obligatory parasites that depend on host cellular factors for their replication as well as for their local and systemic movement to establish infection. Although myosin motors are thought to contribute to plant virus infection, their exact roles in the specific infection steps have not been addressed. Here we investigated the replication, cell-to-cell and systemic spread of Tobacco mosaic virus (TMV) using dominant negative inhibition of myosin activity. We found that interference with the functions of three class VIII myosins and two class XI myosins significantly reduced the local and long-distance transport of the virus. We further determined that the inactivation of myosins XI-2 and XI-K affected the structure and dynamic behavior of the ER leading to aggregation of the viral movement protein (MP) and to a delay in the MP accumulation in plasmodesmata (PD). The inactivation of myosin XI-2 but not of myosin XI-K affected the localization pattern of the 126k replicase subunit and the level of TMV accumulation. The inhibition of myosins VIII-1, VIII-2 and VIII-B abolished MP localization to PD and caused its retention at the plasma membrane. These results suggest that class XI myosins contribute to the viral propagation and intracellular trafficking, whereas myosins VIII are specifically required for the MP targeting to and virus movement through the PD. Thus, TMV appears to recruit distinct myosins for different steps in the cell-to-cell spread of the infection. Viruses are parasites that require the host cell machinery for their propagation within and between cells. Myosins are molecular motors involved in the trafficking of cargos along actin filaments. Plant viruses have evolved to borrow this transport mechanism to aid their infection and spread within the plant. However, little is known about which of the many plant myosins are essential and at which specific steps they act to support virus infection. Here we investigated the role of different N. benthamiana myosins during the infection by Tobacco mosaic virus (TMV). Our results show that class XI myosins play specific roles in the reproduction and intracellular movement of TMV in association with the dynamic endoplasmic reticulum network, whereas class VIII myosins support the specific targeting of the viral movement protein to plasmodesmata and thus the cell-to-cell movement of the virus. Together these results indicate that TMV interacts with distinct myosins during specific infection steps.

22 March 2013 in The Plant Journal
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Journal Article
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ANAnnette Niehl
Annette Niehl
EPEduardo J. Peña
Eduardo J. Peña
KAKhalid Amari
Khalid Amari
MHManfred Heinlein
Manfred Heinlein