Joon Shik Lim

Prof. Joon Shik Lim

orcid

Research Focus & Metrics

Academic Career Length

15Years (2012-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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1 August 2014 in Computer Methods and Programs in Biomedicine
Verified
Journal Article
Closed access
Sang-Hong LeeSang-Hong Lee
Sang-Hong Lee
JLJoon Shik Lim
Joon Shik Lim
JKJae Kwon Kim
Jae Kwon Kim
JYJunggi Yang
Junggi Yang
YLYoungho Lee
Youngho Lee

7 March 2021 in Mathematics
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Journal Article
Open access
PDF file
Jinhee BaeJinhee Bae
Jinhee Bae
MKMinwoo Kim
Minwoo Kim
JLJoon Shik Lim
Joon Shik Lim
Zong Woo GeemZong Woo Geem
Zong Woo Geem
This paper proposes a feature selection method that is effective in distinguishing colorectal cancer patients from normal individuals using K-means clustering and the modified harmony search algorithm. As the genetic cause of colorectal cancer originates from mutations in genes, it is important to classify the presence or absence of colorectal cancer through gene information. The proposed methodology consists of four steps. First, the original data are Z-normalized by data preprocessing. Candidate genes are then selected using the Fisher score. Next, one representative gene is selected from each cluster after candidate genes are clustered using K-means clustering. Finally, feature selection is carried out using the modified harmony search algorithm. The gene combination created by feature selection is then applied to the classification model and verified using 5-fold cross-validation. The proposed model obtained a classification accuracy of up to 94.36%. Furthermore, on comparing the proposed method with other methods, we prove that the proposed method performs well in classifying colorectal cancer. Moreover, we believe that the proposed model can be applied not only to colorectal cancer but also to other gene-related diseases.


24 May 2023 in JMIR Formative Research
Verified
Journal Article
Open access
JKJae Sung Kim
Jae Sung Kim
BWBohyun Wang
Bohyun Wang
MKMeelim Kim
Meelim Kim
JLJung Lee
Jung Lee
HKHyungjun Kim
Hyungjun Kim
NRNeal D Ryan
Neal D Ryan
Background: Lack of quantifiable biomarkers is a major obstacle in diagnosing and treating depression. In adolescents, increasing suicidality during antidepressant treatment further complicates the problem. Objective: We sought to evaluate digital biomarkers for the diagnosis and treatment response of depression in adolescents through a newly developed smartphone app. Methods: We developed the Smart Healthcare System for Teens At Risk for Depression and Suicide app for Android-based smartphones. This app passively collected data reflecting the social and behavioral activities of adolescents, such as their smartphone usage time, physical movement distance, and the number of phone calls and text messages during the study period. Our study consisted of 24 adolescents (mean age 15.4 [SD 1.4] years, 17 girls) with major depressive disorder (MDD) diagnosed with Kiddie Schedule for Affective Disorders and Schizophrenia for School-Age Children-Present and Lifetime Version and 10 healthy controls (mean age 13.8 [SD 0.6] years, 5 girls). After 1 week’s baseline data collection, adolescents with MDD were treated with escitalopram in an 8-week, open-label trial. Participants were monitored for 5 weeks, including the baseline data collection period. Their psychiatric status was measured every week. Depression severity was measured using the Children’s Depression Rating Scale-Revised and Clinical Global Impressions-Severity. The Columbia Suicide Severity Rating Scale was administered in order to assess suicide severity. We applied the deep learning approach for the analysis of the data. Deep neural network was employed for diagnosis classification, and neural network with weighted fuzzy membership functions was used for feature selection. Results: We could predict the diagnosis of depression with training accuracy of 96.3% and 3-fold validation accuracy of 77%. Of the 24 adolescents with MDD, 10 responded to antidepressant treatments. We predicted the treatment response of adolescents with MDD with training accuracy of 94.2% and 3-fold validation accuracy of 76%. Adolescents with MDD tended to move longer distances and use smartphones for longer periods of time compared to controls. The deep learning analysis showed that smartphone usage time was the most important feature in distinguishing adolescents with MDD from controls. Prominent differences were not observed in the pattern of each feature between the treatment responders and nonresponders. The deep learning analysis revealed that the total length of calls received as the most important feature predicting antidepressant response in adolescents with MDD. Conclusions: Our smartphone app demonstrated preliminary evidence of predicting diagnosis and treatment response in depressed adolescents. This is the first study to predict the treatment response of adolescents with MDD by examining smartphone-based objective data with deep learning approaches.

22 October 2013 in Personal and Ubiquitous Computing
Verified
Journal Article
Closed access
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Sang-Hong LeeSang-Hong Lee
Sang-Hong Lee
KCKyungyong Chung
Kyungyong Chung
JLJoon Shik Lim
Joon Shik Lim

1 April 2025 in IEEE Access
Verified
Journal Article
Open access
YAYasir Ali
Yasir Ali
KHKyung Hyun Han
Kyung Hyun Han
Abdul MajeedAbdul Majeed
Abdul Majeed
JLJoon Shik Lim
Joon Shik Lim
Seong Oun HwangSeong Oun Hwang
Seong Oun Hwang
Federated learning (FL) has gained widespread adoption for training artificial intelligence (AI) models while ensuring the confidentiality of client data. However, this privacy-preserving nature of FL also makes it vulnerable to poisoning attacks. To counter these attacks, several defense methods have been developed to identify and filter out poisoned local models before the aggregation process. Nevertheless, these defense methods demonstrate sub-optimal performance in retaining benign local models while discarding poisoned local models primarily due to inadequate filtering strategies. Consequently, these defense methods filter out large proportions of benign local models that are not poisoned, resulting in high false rejection rates or low detection accuracy, which leads to test accuracy degradation of the global model as well. In this paper, we propose the Two-step Defense Framework for Poisoning Attacks Detection (TDF-PAD), which first identifies the obvious-poisoned, obvious-benign, and ambiguous local models by utilizing the interquartile range method. The second step employs the Z-score method to classify ambiguous local models into benign or poisoned local models based on their performance history. Through extensive experimentation on two real-world benchmark datasets, we demonstrate that TDF-PAD outperforms state-of-the-art defense methods by achieving a 0% false positive rate on these benchmark datasets, showing it is generally applicable to any dataset.