The process of formation of aromatic components for agarwood in Aquilaria sinensis is closely related to endophytic fungi and the result of complex multiple long-term joint interactions with them. However, the interactions between the aromatic components and endophytic fungi remain unclear during the formation of agarwood. In this study, precise mixed solution of hormones, inorganic salts, and fungi was used to induce its formation in A. sinensis, and sample blocks of wood were collected at different times after inoculation. This study showed that the aromatic compounds found in the three treatments of A. sinensis were primarily chromones (31.70–33.65%), terpenes (16.68–27.10%), alkanes (15.99–23.83%), and aromatics (3.13–5.07%). Chromones and terpenes were the primary components that characterized the aroma. The different sampling times had a more pronounced impact on the richness and diversity of endophytic fungal communities in the A. sinensis xylem than the induction treatments. The species annotation of the operational taxonomic units (OTUs) demonstrated that the endophytic fungi were primarily composed of 18 dominant families and 20 dominant genera. A linear regression analysis of the network topology properties with induction time showed that the interactions among the fungal species continued to strengthen, and the network structure tended to become more complex. The terpenes significantly negatively correlated with the Pielou evenness index (p < 0.05), while the chromones significantly positively correlated with the OTUs and Shannon indices.

An inductive combination of plant growth regulators, inorganic salts, and fungi is essential for the formation of aromatic components in the xylem of Aquilaria sinensis. However, the dynamics of xylem physiology and the relationships between physiological properties and aromatic components after artificial induction remain unclear. In this study, the changes in physiological properties of A. sinensis xylem during induction were determined and analyzed under four induction treatments and a control group. The defense hormone contents of jasmonic acid, salicylic acid, aminocyclopropane-1-carboxylic acid, and abscisic acid obtained from the four induction treatments increased significantly. However, the concentrations of gibberellin and indoleacetic acid were decreased compared to the control group. An initially upward and then downward trend was observed in the main antioxidant enzyme activities. Additionally, malonaldehyde content decreased obviously, while proline content tended to increase and then decrease as induction continued. The total and soluble sugar content was evidently reduced after treatment, and the soluble sugar content recovered more rapidly with time. Thirty-three aromatic components were identified in all treatments, and the primary aromatic components were terpenes, aromatics and chromones, the relative contents of which varied among treatments. These results provide new insights for optimization and innovation of agarwood induction techniques by exploring the formation of aromatics in the xylem of A. sinensis and its physiological responses following induction with exogenous substances (ethephon, NaCl, CaCl₂ and fungal mixed solution).