Tom Simpson

Prof. Tom Simpson

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Research Focus & Metrics

Academic Career Length

29Years (1998-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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25 July 2007 in Chemical Communications
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ABAndrew M. Bailey
Andrew M. Bailey
RCRussell Cox
Russell Cox
KHKate Harley
Kate Harley
CLColin M. Lazarus
Colin M. Lazarus
TSTom Simpson
Tom Simpson
ESElizabeth Skellam
Elizabeth Skellam
Isolation and sequencing of a PKS gene isolated from xenovulene-producing cultures of Acremonium strictum indicated the presence of NT-, KS-, AT-, PT-, C-MeT- and R-domains; heterologous expression in Aspergillus oryzae resulted in the production of 3-methylorcinaldehyde, demonstrating the role of the terminal reductase domain in product release.

19 May 1998 in Biochemistry
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Journal Article
Closed access
JSJoachim Schröder
Joachim Schröder
SRSigrid Raiber
Sigrid Raiber
TBThorsten Berger
Thorsten Berger
ASAxel Schmidt
Axel Schmidt
JSJürgen Schmidt
Jürgen Schmidt
GSGudrun Schröder
Gudrun Schröder

26 November 2018 in Chemical Science
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Journal Article
Open access
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ASAgnieszka J. Szwalbe
Agnieszka J. Szwalbe
Katherine WilliamsKatherine Williams
Katherine Williams
ZSZhongshu Song
Zhongshu Song
KMKate de Mattos-Shipley
Kate de Mattos-Shipley
JVJason L. Vincent
Jason L. Vincent
TSTom Simpson
Tom Simpson
Two new dihydroxy-xanthone metabolites, agnestins A and B, were isolated from Paecilomyces variotii along with a number of related benzophenones and xanthones including monodictyphenone. The structures were elucidated by NMR analyses and X-ray crystallography. The agnestin (agn) biosynthetic gene cluster was identified and targeted gene disruptions of the PKS, Baeyer–Villiger monooxygenase, and other oxido-reductase genes revealed new details of fungal xanthone biosynthesis. In particular, identification of a reductase responsible for in vivo anthraquinone to anthrol conversion confirms a previously postulated essential step in aromatic deoxygenation of anthraquinones, e.g. emodin to chrysophanol.

21 January 2019 in Chemical Science
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CGClaudio Greco
Claudio Greco
KMKate de Mattos-Shipley
Kate de Mattos-Shipley
ABAndrew M. Bailey
Andrew M. Bailey
NMNicholas P. Mulholland
Nicholas P. Mulholland
JVJason L. Vincent
Jason L. Vincent
TSTom Simpson
Tom Simpson
Three novel dimeric xanthones, cryptosporioptides A–C were isolated from Cryptosporiopsis sp. 8999 and their structures elucidated. Methylation of cryptosporioptide A gave a methyl ester with identical NMR data to cryptosporioptide, a compound previously reported to have been isolated from the same fungus. However, HRMS analysis revealed that cryptosporioptide is a symmetrical dimer, not a monomer as previously proposed, and the revised structure was elucidated by extensive NMR analysis. The genome of Cryptosporiopsis sp. 8999 was sequenced and the dimeric xanthone (dmx) biosynthetic gene cluster responsible for the production of the cryptosporioptides was identified. Gene disruption experiments identified a gene (dmxR5) encoding a cytochrome P450 oxygenase as being responsible for the dimerisation step late in the biosynthetic pathway. Disruption of dmxR5 led to the isolation of novel monomeric xanthones. Cryptosporioptide B and C feature an unusual ethylmalonate subunit: a hrPKS and acyl CoA carboxylase are responsible for its formation. Bioinformatic analysis of the genomes of several fungi producing related xanthones, e.g. the widely occurring ergochromes, and related metabolites allows detailed annotation of the biosynthetic genes, and a rational overall biosynthetic scheme for the production of fungal dimeric xanthones to be proposed.

12 October 2022 in Natural Product Reports
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KMKate M. J. de Mattos-Shipley
Kate M. J. de Mattos-Shipley
TSTom Simpson
Tom Simpson
Covering: up to 2022 A very large group of biosynthetically linked fungal secondary metabolites are formed via the key intermediate emodin and its corresponding anthrone. The group includes anthraquinones such as chrysophanol and cladofulvin, the grisandienes geodin and trypacidin, the diphenyl ether pestheic acid, benzophenones such as monodictyphenone and various xanthones including the prenylated shamixanthones, the agnestins and dimeric xanthones such as the ergochromes, cryptosporioptides and neosartorin. Such compounds exhibit a wide range of bioactivities and as such have been utilised in traditional medicine for centuries, as well as garnering more recent interest from the pharmaceutical sector. Additional interest comes from industries such as textiles and cosmetics due to their use as natural colourants. A variety of biosynthetic routes and mechanisms have been proposed for this family of compounds, being altered and updated as new biosynthetic methods develop and new results emerge. After nearly 100 years of such research, this review aims to provide a comprehensive overview of what is currently known about the biosynthesis of this important family, amalgamating the early chemical and biosynthetic studies with the more recent genetics-based advances and comparative bioinformatics.

13 November 2009 in Chemical Communications
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JWJien Wu
Jien Wu
HZHai-Bao Zhang
Hai-Bao Zhang
JXJin-Ling Xu
Jin-Ling Xu
RCRussell Cox
Russell Cox
TSTom Simpson
Tom Simpson
LZLian-Hui Zhang
Lian-Hui Zhang
The structure of zeamine, a novel polyamino-amide antibiotic metabolite of Dickeya zeae has been established by NMR and detailed MS analyses; labelling studies with 13C-labelled acetates suggest that the repeating secondary amine containing motif may be biosynthesised via a modular PKS containing aminotransferase domains.