Sébastien Fiorucci

Dr. Sébastien Fiorucci


Research Focus & Metrics

Academic Career Length

23Years (2004-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

View All Publications
25 September 2021 in Journal of Cheminformatics
Verified
Journal Article
Open access
PDF file
CBCédric Bouysset
Cédric Bouysset
SFSébastien Fiorucci
Sébastien Fiorucci
Interaction fingerprints are vector representations that summarize the three-dimensional nature of interactions in molecular complexes, typically formed between a protein and a ligand. This kind of encoding has found many applications in drug-discovery projects, from structure-based virtual-screening to machine-learning. Here, we present ProLIF, a Python library designed to generate interaction fingerprints for molecular complexes extracted from molecular dynamics trajectories, experimental structures, and docking simulations. It can handle complexes formed of any combination of ligand, protein, DNA, or RNA molecules. The available interaction types can be fully reparametrized or extended by user-defined ones. Several tutorials that cover typical use-case scenarios are available, and the documentation is accompanied with code snippets showcasing the integration with other data-analysis libraries for a more seamless user-experience. The library can be freely installed from our GitHub repository (https://github.com/chemosim-lab/ProLIF).

17 January 2007 in Journal of Agricultural and Food Chemistry
Verified
Journal Article
Closed access
SFSébastien Fiorucci
Sébastien Fiorucci
JGJérôme Golebiowski
Jérôme Golebiowski
DCDaniel Cabrol-Bass
Daniel Cabrol-Bass
SASerge Antonczak
Serge Antonczak

1 May 2017 in Phytochemistry
Verified
Journal Article
Closed access
YDYolande Despinasse
Yolande Despinasse
SFSébastien Fiorucci
Sébastien Fiorucci
SASerge Antonczak
Serge Antonczak
SMSandrine Moja
Sandrine Moja
ABAurélie Bony
Aurélie Bony
FJFrédéric Jullien
Frédéric Jullien

1 April 2017 in Food Chemistry
Verified
Journal Article
Closed access
JCJean-Baptiste Chéron
Jean-Baptiste Chéron
ICIuri Casciuc
Iuri Casciuc
JGJérôme Golebiowski
Jérôme Golebiowski
SASerge Antonczak
Serge Antonczak
SFSébastien Fiorucci
Sébastien Fiorucci

23 April 2019 in Chemical Senses
Verified
Journal Article
Open access
PDF file
YWYi Wang
Yi Wang
AZAmanda L Zajac
Amanda L Zajac
WLWeiwei Lei
Weiwei Lei
CCCarol M Christensen
Carol M Christensen
RMRobert F Margolskee
Robert F Margolskee
PJPeihua Jiang
Peihua Jiang
Divalent and trivalent salts exhibit a complex taste profile. They are perceived as being astringent/drying, sour, bitter, and metallic. We hypothesized that human bitter-taste receptors may mediate some taste attributes of these salts. Using a cell-based functional assay, we found that TAS2R7 responds to a broad range of divalent and trivalent salts, including zinc, calcium, magnesium, copper, manganese, and aluminum, but not to potassium, suggesting TAS2R7 may act as a metal cation receptor mediating bitterness of divalent and trivalent salts. Molecular modeling and mutagenesis analysis identified 2 residues, H943.37 and E2647.32, in TAS2R7 that appear to be responsible for the interaction of TAS2R7 with metallic ions. Taste receptors are found in both oral and extraoral tissues. The responsiveness of TAS2R7 to various mineral salts suggests it may act as a broad sensor, similar to the calcium-sensing receptor, for biologically relevant metal cations in both oral and extraoral tissues.

29 June 2010 in Proteins: Structure, Function, and Bioinformatics
Verified
Journal Article
Closed access
PDF file
SFSébastien Fiorucci
Sébastien Fiorucci
MZMartin Zacharias
Martin Zacharias