Background: Within the UK, COVID-19 has contributed towards over 103,000 deaths. Although multiple risk factors for COVID-19 have been identified, using this data to improve clinical care has proven challenging. The main aim of this study is to develop a reliable, multivariable predictive model for COVID-19 in-patient outcomes, thus enabling risk-stratification and earlier clinical decision-making. Methods: Anonymised data consisting of 44 independent predictor variables from 355 adults diagnosed with COVID-19, at a UK hospital, was manually extracted from electronic patient records for retrospective, case–control analysis. Primary outcomes included inpatient mortality, required ventilatory support, and duration of inpatient treatment. Pulmonary embolism sequala was the only secondary outcome. After balancing data, key variables were feature selected for each outcome using random forests. Predictive models were then learned and constructed using Bayesian networks. Results: The proposed probabilistic models were able to predict, using feature selected risk factors, the probability of the mentioned outcomes. Overall, our findings demonstrate reliable, multivariable, quantitative predictive models for four outcomes, which utilise readily available clinical information for COVID-19 adult inpatients. Further research is required to externally validate our models and demonstrate their utility as risk stratification and clinical decision-making tools.
This paper presents a novel mathematical framework for assessing and predicting the resilience of critical coastal infrastructures against wave overtopping hazards and extreme climatic events. A probabilistic sensitivity analysis model is developed to evaluate the relative influence of hydrodynamic, geomorphological, and structural factors contributing to wave overtopping dynamics. Additionally, a stochastic Gaussian process (GP) model is introduced to predict the mean overtopping discharge from coastal defences. Both the sensitivity analysis and the predictive models are validated using a large homogeneous dataset comprising 163 laboratory and field-scale tests. Statistical evaluations demonstrate the superior performance of the GPs in identifying key parameters driving wave overtopping and predicting mean discharge rates, outperforming existing regression-based formulae. The proposed model offers a robust predictive tool for assessing the performance of critical coastal protection infrastructures under various climate scenarios.
3 April 2019 in Engineering Analysis with Boundary Elements
The prediction of protein-protein interactions (PPIs) is essential to understand the cellular processes from a medical perspective. Among the various machine learning techniques, kernel-based Support Vector Machine (SVM) has been commonly employed to discriminate between interacting and non-interacting protein pairs. The main drawback of employing the kernel-based SVM to datasets with many features, such as the primary sequence-based protein-protein dataset, is the significant increase in computational time of training stage. This increase in computational time is mainly due to the presence of the kernel in solving the quadratic optimisation problem (QOP) involved in nonlinear SVM. In order to fix this issue, we propose a novel and efficient computational algorithm by approximating the kernel-based SVM using a low-rank truncated Mercer series as well as desired. As a result, the QOP for the approximated kernel-based SVM will be very tractable in the sense that there is a significant reduction in computational time of training and validating stages. We illustrate the novelty of the proposed method by predicting the PPIs of “S. Cerevisiae” where the protein features extracted using the multiscale local descriptor (MLD), and then we compare the predictive performance of the proposed low-rank approximation with the existing methods. Finally, the new method results in significant reduction in computational time for predicting PPIs with almost as accuracy as kernel-based SVM.