Ylanna Bonfim

Ms. Ylanna Bonfim

orcid

Research Focus & Metrics

Academic Career Length

3Years (2024-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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24 July 2024 in Pharmaceuticals
Verified
Journal Article
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MSMonique Reis de Santana
Monique Reis de Santana
YBYlanna Bonfim
Ylanna Bonfim
Késsia Souza SantosKéssia Souza Santos
Késsia Souza Santos
MJManoelito Coelho dos Santos junior
Manoelito Coelho dos Santos junior
MVMauricio Moraes Moraes Victor
Mauricio Moraes Moraes Victor
SCSilvia. Costa
Silvia. Costa
The molecular mechanisms underlying the observed anticancer effects of flavonoids remain unclear. Increasing evidence shows that the aryl hydrocarbon receptor (AHR) plays a crucial role in neoplastic disease progression, establishing it as a potential drug target. This study evaluated the potential of hydroxy flavonoids, known for their anticancer properties, to interact with AHR, both in silico and in vitro, aiming to understand the mechanisms of action and identify selective AHR modulators. A PAS-B domain homology model was constructed to evaluate in silico interactions of chrysin, naringenin, quercetin apigenin and agathisflavone. The EROD activity assay measured the effects of flavonoids on AHR’s activity in human breast cancer cells (MCF7). Simulations showed that chrysin, apigenin, naringenin, and quercetin have the highest AHR binding affinity scores (−13.14 to −15.31), while agathisflavone showed low scores (−0.57 and −5.14). All tested flavonoids had the potential to inhibit AHR activity in a dose-dependent manner in the presence of an agonist (TCDD) in vitro. This study elucidates the distinct modulatory effects of flavonoids on AHR, emphasizing naringenin’s newly described antagonistic potential. It underscores the importance of understanding flavonoid’s molecular mechanisms, which is crucial for developing novel cancer therapies based on these molecules.

8 January 2024 in Revista Científica Eletrônica do Conselho Regional de Farmácia da Bahia
Verified
Journal Article
Open access
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Késsia Souza SantosKéssia Souza Santos
Késsia Souza Santos
YBYlanna Bonfim
Ylanna Bonfim
MJManoelito Coelho dos Santos junior
Manoelito Coelho dos Santos junior
Tuberculose é uma doença infecciosa causada pelo Mycobacterium tuberculosis que continua sendo uma das principais causas de morte por doença infecciosa. Este estudo teve como objetivo a identificação de potenciais inibidores da pantotenato sintetase, enzima essencial para a bactéria, através de triagem virtual hierárquica. Modelos baseados na forma e volume moleculares foram construídos e validados para filtrar um banco de dados com estruturas químicas produtos naturais. As moléculas selecionadas foram acopladas na estrutura do alvo molecular, obtido junto ao Protein Data Bank sob o código 3IUB com o programa FRED. O composto ZINC000012489800 foi a mais bem ranqueada. As interações intermoleculares mostraram interações hidrofóbicas, ligações de hidrogênio (aceptoras e doadoras) e iônicas, entre o composto identificado e aminoácidos importantes para o reconhecimento molecular já descritas na literatura. A molécula possui parâmetros farmacocinéticos razoáveis e bom índice de segurança toxicológico. Este estudo demonstra a eficácia dos métodos in silico na identificação de um composto promissor para o tratamento da tuberculose multirresistente, representando um passo importante na busca por novas terapias. Referências Bloom B, et al. Tuberculosis. Major Infect Dis. 2017;6(3):233-313. DOI: 10.1596/978-1-4648-0524-0_ch11. Moreira AD, Kritsk AL, Carvalho AC. Social determinants of health and catastrophic costs associated with the diagnosis and treatment of tuberculosis. J. Bras. de Pneumol. 23 fev 2020; 46(5): e20200015. DOI: 10.36416/1806-3756/e20200015. World Health Organization. Tuberculosis [Internet]; [citado 19 out 2023]. Available from: https://www.who.int/health-topics/tuberculosis#tab=tab_1. World Health Organization. Global Tuberculosis Report [Internet]. Geneva: WHO [citado 19 out 2023]. 68p. 2022. Available from: https://iris.who.int/bitstream/handle/10665/363752/9789240061729-eng.pdf?sequence=1. Ministério da Saúde (BR). Tuberculose [Internet]. Brasília: [editor desconhecido]; mar 2023 [citado 11 out 2023]. 64p. Boletim epidemiológico 2023. Available from: https://www.gov.br/saude/pt-br/centrais-de-conteudo/publicacoes/boletins/epidemiologicos/especiais/2023/boletim-epidemiologico-de-tuberculose-numero-especial-mar.2023. World Health Organization. TB BR profile [Internet]. [citado 19 out 2023]. Available from: https://worldhealthorg.shinyapps.io/tb_profiles/?_inputs_&entity_type="country"&lan="EN"&iso2="BR". Lee M, et al. Delamanid, linezolid, levofloxacin, and pyrazinamide for the treatment of patients with fluoroquinolone-sensitive multidrug-resistant tuberculosis (Treatment Shortening of MDR-TB Using Existing and New Drugs, MDR-END): study protocol for a phase II/III, multicenter, randomized, open-label clinical trial. Trials. 2019;20(1). DOI: 10.1186/s13063-018-3053-1. Brasil. Ministério da Saúde. Nota técnica sobre as mudanças no tratamento da tuberculose no Brasil para adultos e adolescentes – Versão 2 [internet]. [citado 15 dez 2023] Available from: http://www1.saude.rs.gov.br/dados/1293729099101nota%20t%e9cnica%20-%202%aa%20vers%e3o%20%28corrigida%20em%2022-10%29.pdf Borisov, S et al. “Surveillance of adverse events in the treatment of drug-resistant tuberculosis: first global report.” The Europ. Respirat. Jour. vol. 54,6 1901522. 19 Dec. 2019 [citado 15 dez 2023.]. DOI:10.1183/13993003.01522-2019 Tiberi S, et al. Drug resistant TB – latest developments in epidemiology, diagnostics and management. Int J Infect Dis. Mar 2022 [citado 19 out 2023]. DOI: 10.1016/j.ijid.2022.03.026. Dias FSS, Lima CCM. Interruption of the treatment of pulmonary tuberculosis: Risks for the individual and for public health. Braz. J. Develop. 2020 Sep. 21 [citado 11 out 2023.];6(9):70186-95. DOI: 10.34117/bjdv6n9-463. Silva GM. Planejamento computacional e avaliação biológica de inibidores alostéricos de glicogênio sintase cinase 3-β com interesse na doença de Alzheimer [Dissertação de doutorado]. Ribeirão Preto: Universidade de São Paulo; 2023 [citado 26 out 2023]. 143p. Wang S, Eisenberg D. Crystal structures of a pantothenate synthetase from M. tuberculosis and its complexes with substrates and a reaction intermediate. Protein Sci. Maio 2003 [citado 15 out 2023];12(5):1097-108. DOI: 10.1110/ps.0241803. Cusinato M. Estudos químicos e atividade antimicrobiana de bactérias associadas à abelha sem ferrão Scaptotrigona depilis [Dissertação de mestrado]. Ribeirão Preto: Universidade de São Paulo; 2020 [citado 20 out 2023]. 23p. Hopkins AL, Groom CR, Alex A. Ligand efficiency: a useful metric for lead selection. Drug Disc. Today. 2004 May 1 [cited 2023 Dec 15];9(10):430–1. DOI: 10.1016/S1359-6446(04)03069-7. Mendez D, et al. ChEMBL: towards direct deposition of bioassay data. Nucleic Acids Res. 2019; 47(D1): D930-D940. DOI:10.1093/nar/gky1075. vROCS 3.6.0.1. OpenEye, Cadence Molecular Sciences, Santa Fe, NM. http://www.eyesopen.com. Samala G, et al. Identification and development of 2-methylimidazo[1,2-a] pyridine-3-carboxamides as Mycobacterium tuberculosis pantothenate synthetase inhibitors. Bioorg. & Med. Chem. 2014 Aug. 22(15):4223–32. DOI:10.1016/j.bmc.2014.05.038. Yang Y, et al. A discovery of novel Mycobacterium tuberculosis pantothenate synthetase inhibitors based on the molecular mechanism of actinomycin D inhibition. Bioorg. & Med. Chem. Let. 2011 Jul; 21(13):3943–6. DOI: 10.1016/j.bmcl.2011.05.021. Mysinger MM, Carchia M, Irwin JJ, Shoichet BK. Directory of Useful Decoys, Enhanced (DUD-E): Better Ligands and Decoys for Better Benchmarking. J Med Chem. 5 jul 2012 [citado 10 out 2023];55(14):6582-94. DOI: 10.1021/jm300687e. SigmaPlot...