Nadia Parachin

Dr. Nadia Parachin

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Research Focus & Metrics

Academic Career Length

22Years (2005-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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29 April 2018 in Microorganisms
Verified
Journal Article
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AGAntonio Milton Vieira Gomes
Antonio Milton Vieira Gomes
TCTalita Souza Carmo
Talita Souza Carmo
LCLucas Silva Carvalho
Lucas Silva Carvalho
FBFrederico Mendonça Bahia
Frederico Mendonça Bahia
NPNadia Parachin
Nadia Parachin
Recombinant protein production emerged in the early 1980s with the development of genetic engineering tools, which represented a compelling alternative to protein extraction from natural sources. Over the years, a high level of heterologous protein was made possible in a variety of hosts ranging from the bacteria Escherichia coli to mammalian cells. Recombinant protein importance is represented by its market size, which reached $1654 million in 2016 and is expected to reach $2850.5 million by 2022. Among the available hosts, yeasts have been used for producing a great variety of proteins applied to chemicals, fuels, food, and pharmaceuticals, being one of the most used hosts for recombinant production nowadays. Historically, Saccharomyces cerevisiae was the dominant yeast host for heterologous protein production. Lately, other yeasts such as Komagataella sp., Kluyveromyces lactis, and Yarrowia lipolytica have emerged as advantageous hosts. In this review, a comparative analysis is done listing the advantages and disadvantages of using each host regarding the availability of genetic tools, strategies for cultivation in bioreactors, and the main techniques utilized for protein purification. Finally, examples of each host will be discussed regarding the total amount of protein recovered and its bioactivity due to correct folding and glycosylation patterns.

1 December 2012 in Peptides
Verified
Journal Article
Closed access
NPNadia Parachin
Nadia Parachin
KMKelly Cristina Mulder
Kelly Cristina Mulder
AVAntônio Américo Barbosa Viana
Antônio Américo Barbosa Viana
SDSimoni Campos Dias
Simoni Campos Dias
Octavio FrancoOctavio Franco
Octavio Franco

1 July 2016 in Microbial Cell Factories
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Journal Article
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JOJuliana Davies de Oliveira
Juliana Davies de Oliveira
LCLucas Silva Carvalho
Lucas Silva Carvalho
AGAntônio Milton Vieira Gomes
Antônio Milton Vieira Gomes
LQLucio Queiroz
Lucio Queiroz
BMBeatriz Simas Magalhães
Beatriz Simas Magalhães
NPNadia Parachin
Nadia Parachin
Hyaluronic acid, or HA, is a rigid and linear biopolymer belonging to the class of the glycosaminoglycans, and composed of repeating units of the monosaccharides glucuronic acid and N-acetylglucosamine. HA has multiple important functions in the human body, due to its properties such as bio-compatibility, lubricity and hydrophilicity, it is widely applied in the biomedical, food, health and cosmetic fields. The growing interest in this molecule has motivated the discovery of new ways of obtaining it. Traditionally, HA has been extracted from rooster comb-like animal tissues. However, due to legislation laws HA is now being produced by bacterial fermentation using Streptococcus zooepidemicus, a natural producer of HA, despite it being a pathogenic microorganism. With the expansion of new genetic engineering technologies, the use of organisms that are non-natural producers of HA has also made it possible to obtain such a polymer. Most of the published reviews have focused on HA formulation and its effects on different body tissues, whereas very few of them describe the microbial basis of HA production. Therefore, for the first time this review has compiled the molecular and genetic bases for natural HA production in microorganisms together with the main strategies employed for heterologous production of HA.

1 November 2015 in Biotechnology Advances
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Journal Article
Closed access
KMKelly C.L. Mulder
Kelly C.L. Mulder
FMFlávia Mulinari
Flávia Mulinari
Octavio FrancoOctavio Franco
Octavio Franco
MSMaria S.F. Soares
Maria S.F. Soares
BMBeatriz S. Magalhães
Beatriz S. Magalhães
NPNadia Parachin
Nadia Parachin

1 May 2019 in Frontiers in Bioengineering and Biotechnology
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Journal Article
Open access
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JNJoão Heitor Manfrão Netto
João Heitor Manfrão Netto
AGAntônio Milton Vieira Gomes
Antônio Milton Vieira Gomes
NPNadia Parachin
Nadia Parachin
The methylotrophic yeast Hansenula polymorpha, known as a non-conventional yeast, is used for the last 30 years for the production of recombinant proteins, including enzymes, vaccines, and biopharmaceuticals. Although a large number of reviews have been published elucidating the applications of this yeast as a cell factory, the latest was released about 10 years ago. Therefore, this review aimed at summarizing available information on the use of H. polymorpha as a host for recombinant protein production in the last decade. Examples of chemicals and virus-like particles produced using this yeast also are discussed. Firstly, the aspects that feature this yeast as a host for recombinant protein production are highlighted including the techniques available for its genetic manipulation as well as strategies for cultivation in bioreactors. Special attention is given to the novel genomic editing tools, mainly CRISPR/Cas9 that was recently established in this yeast. Finally, recent examples of using H. polymorpha as an expression platform are presented and discussed. The production of human Parathyroid Hormone (PTH) and Staphylokinase (SAK) in H. polymorpha are described as case studies for process establishment in this yeast. Altogether, this review is a guideline for this yeast utilization as an expression platform bringing a thorough analysis of the genetic aspects and fermentation protocols used up to date, thus encouraging the production of novel biomolecules in H. polymorpha.

26 September 2016 in Biotechnology for Biofuels
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Journal Article
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TRThaila F dos Reis
Thaila F dos Reis
PLPollyne Borborema Almeida de Lima
Pollyne Borborema Almeida de Lima
NPNadia Parachin
Nadia Parachin
FMFabiana Bombonato Mingossi
Fabiana Bombonato Mingossi
JOJuliana Oliveira
Juliana Oliveira
Gustavo Henrique GoldmanGustavo Henrique Goldman
Gustavo Henrique Goldman
The conversion of lignocellulosic biomass to biofuels (second-generation biofuel production) is an environmentally friendlier alternative to petroleum-based energy sources. Enzymatic deconstruction of lignocellulose, catalyzed by filamentous fungi such as Aspergillus nidulans, releases a mixture of mono- and polysaccharides, including hexose (glucose) and pentose (xylose) sugars, cellodextrins (cellobiose), and xylooligosaccharides (xylobiose). These sugars can subsequently be fermented by yeast cells to ethanol. One of the major drawbacks in this process lies in the inability of yeast, such as Saccharomyces cerevisiae, to successfully internalize sugars other than glucose. The aim of this study was, therefore, to screen the genome of A. nidulans, which encodes a multitude of sugar transporters, for transporters able to internalize non-glucose sugars and characterize them when introduced into S. cerevisiae. This work identified two proteins in A. nidulans, CltA and CltB, with roles in cellobiose transport and cellulose signaling, respectively. CltA, when introduced into S. cerevisiae, conferred growth on low and high concentrations of cellobiose. Deletion of cltB resulted in reduced growth and extracellular cellulase activity in A. nidulans in the presence of cellobiose. CltB, when introduced into S. cerevisiae, was not able to confer growth on cellobiose, suggesting that this protein is a sensor rather than a transporter. However, we have shown that the introduction of additional functional copies of CltB increases the growth in the presence of low concentrations of cellobiose, strongly indicating CltB is able to transport cellobiose. Furthermore, a previously identified glucose transporter, HxtB, was also found to be a major xylose transporter in A. nidulans. In S. cerevisiae, HxtB conferred growth on xylose which was accompanied by ethanol production. This work identified a cellobiose transporter, a xylose transporter, and a putative cellulose transceptor in A. nidulans. This is the first time that a sensor role for a protein in A. nidulans has been proposed. Both transporters are also able to transport glucose, highlighting the preference of A. nidulans for this carbon source. This work provides a basis for future studies which aim at characterizing and/or genetically engineering Aspergillus spp. transporters, which, in addition to glucose, can also internalize other carbon sources, to improve transport and fermentation of non-glucose sugars in S. cerevisiae.