German Shipulin

Dr. German Shipulin

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Research Focus & Metrics

Academic Career Length

31Years (1996-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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1 October 1998 in Clinical Infectious Diseases
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Journal Article
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APAlexander Platonov
Alexander Platonov
GSGerman Shipulin
German Shipulin
IVIrina V. Vershinina
Irina V. Vershinina
JDJacob Dankert
Jacob Dankert
JWJan G. J. van de Winkel
Jan G. J. van de Winkel
EKEd J. Kuijper
Ed J. Kuijper
Phagocytosis of bacteria constitutes an important defense mechanism against invasive bacterial diseases. Efficacy of phagocytosis by polymorphonuclea

16 January 2023 in Metabolites
Verified
Journal Article
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Natalia A. ShnayderNatalia A. Shnayder
Natalia A. Shnayder
Violetta V GrechkinaVioletta V Grechkina
Violetta V Grechkina
Aiperi Kylychbekovna KhasanovaAiperi Kylychbekovna Khasanova
Aiperi Kylychbekovna Khasanova
EBElena N. Bochanova
Elena N. Bochanova
EDEvgenia A. Dontceva
Evgenia A. Dontceva
RNRegina F. Nasyrova
Regina F. Nasyrova
Valproic acid (VPA) and its salts are psychotropic drugs that are widely used in neurological diseases (epilepsy, neuropathic pain, migraine, etc.) and psychiatric disorders (schizophrenia, bipolar affective disorder, addiction diseases, etc.). In addition, the indications for the appointment of valproate have been expanding in recent years in connection with the study of new mechanisms of action of therapeutic and toxic metabolites of VPA in the human body. Thus, VPA is considered a component of disease-modifying therapy for multiple tumors, neurodegenerative diseases (Huntington’s disease, Parkinson’s disease, Duchenne progressive dystrophy, etc.), and human immunodeficiency syndrome. The metabolism of VPA is complex and continues to be studied. Known pathways of VPA metabolism include: β-oxidation in the tricarboxylic acid cycle (acetylation); oxidation with the participation of cytochrome P-450 isoenzymes (P-oxidation); and glucuronidation. The complex metabolism of VPA explains the diversity of its active and inactive metabolites, which have therapeutic, neutral, or toxic effects. It is known that some active metabolites of VPA may have a stronger clinical effect than VPA itself. These reasons explain the relevance of this narrative review, which summarizes the results of studies of blood (serum, plasma) and urinary metabolites of VPA from the standpoint of the pharmacogenomics and pharmacometabolomics. In addition, a new personalized approach to assessing the cumulative risk of developing VPA-induced adverse reactions is presented and ways for their correction are proposed depending on the patient’s pharmacogenetic profile and the level of therapeutic and toxic VPA metabolites in the human body fluids (blood, urine).

1 November 2009 in The Journal of Infectious Diseases
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Journal Article
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APA. T. Podkolzin
A. T. Podkolzin
EFE. B. Fenske
E. B. Fenske
NAN. Yu Abramycheva
N. Yu Abramycheva
GSGerman Shipulin
German Shipulin
OSO. I. Sagalova
O. I. Sagalova
VPV. I. Pokrovsky
V. I. Pokrovsky
During a 2-year period in 2005–2007, we conducted surveillance of group A rotaviruses and other enteric agents among patients hospitalized with acute

1 September 2019 in Emerging Infectious Diseases
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Journal Article
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LKLyudmila S. Karan
Lyudmila S. Karan
Marat T. MakenovMarat T. Makenov
Marat T. Makenov
MKMikhail G. Korneev
Mikhail G. Korneev
NSNoumany Sacko
Noumany Sacko
SBSanaba Boumbaly
Sanaba Boumbaly
APAnna Y. Popova
Anna Y. Popova
In 2018, a previously unknown Ebola virus, Bombali virus, was discovered in Sierra Leone. We describe detection of Bombali virus in Guinea. We found viral RNA in internal organs of 3 Angolan free-tailed bats (Mops condylurus) trapped in the city of N'Zerekore and in a nearby village.

21 March 2016 in Nature Microbiology
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Journal Article
Open access
ENElisabeth Njamkepo
Elisabeth Njamkepo
NFNizar Fawal
Nizar Fawal
ATAlicia Tran-Dien
Alicia Tran-Dien
JHJane Hawkey
Jane Hawkey
NSNancy Strockbine
Nancy Strockbine
FWFrançois-Xavier Weill
François-Xavier Weill
Together with plague, smallpox and typhus, epidemics of dysentery have been a major scourge of human populations for centuries1. A previous genomic study concluded that Shigella dysenteriae type 1 (Sd1), the epidemic dysentery bacillus, emerged and spread worldwide after the First World War, with no clear pattern of transmission2. This is not consistent with the massive cyclic dysentery epidemics reported in Europe during the eighteenth and nineteenth centuries1,3,4 and the first isolation of Sd1 in Japan in 18975. Here, we report a whole-genome analysis of 331 Sd1 isolates from around the world, collected between 1915 and 2011, providing us with unprecedented insight into the historical spread of this pathogen. We show here that Sd1 has existed since at least the eighteenth century and that it swept the globe at the end of the nineteenth century, diversifying into distinct lineages associated with the First World War, Second World War and various conflicts or natural disasters across Africa, Asia and Central America. We also provide a unique historical perspective on the evolution of antibiotic resistance over a 100-year period, beginning decades before the antibiotic era, and identify a prevalent multiple antibiotic-resistant lineage in South Asia that was transmitted in several waves to Africa, where it caused severe outbreaks of disease.

14 February 2020 in Viruses
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Daniil KiselevDaniil Kiselev
Daniil Kiselev
AMAlina Matsvay
Alina Matsvay
IAIvan S. Abramov
Ivan S. Abramov
VDVladimir George Dedkov
Vladimir George Dedkov
GSGerman Shipulin
German Shipulin
Kamil F KhafizovKamil F Khafizov
Kamil F Khafizov
Viruses are evolving at an alarming rate, spreading and inconspicuously adapting to cutting-edge therapies. Therefore, the search for rapid, informative and reliable diagnostic methods is becoming urgent as ever. Conventional clinical tests (PCR, serology, etc.) are being continually optimized, yet provide very limited data. Could high throughput sequencing (HTS) become the future gold standard in molecular diagnostics of viral infections? Compared to conventional clinical tests, HTS is universal and more precise at profiling pathogens. Nevertheless, it has not yet been widely accepted as a diagnostic tool, owing primarily to its high cost and the complexity of sample preparation and data analysis. Those obstacles must be tackled to integrate HTS into daily clinical practice. For this, three objectives are to be achieved: (1) designing and assessing universal protocols for library preparation, (2) assembling purpose-specific pipelines, and (3) building computational infrastructure to suit the needs and financial abilities of modern healthcare centers. Data harvested with HTS could not only augment diagnostics and help to choose the correct therapy, but also facilitate research in epidemiology, genetics and virology. This information, in turn, could significantly aid clinicians in battling viral infections.