Yun Ren

Dr. Yun Ren


Research Focus & Metrics

Academic Career Length

5Years (2022-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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8 August 2024 in Agriculture
Verified
Journal Article
Open access
PDF file
HHHao Hu
Hao Hu
YRYun Ren
Yun Ren
HZHongkui Zhou
Hongkui Zhou
WLWeidong Lou
Weidong Lou
HPHao Pengfei
Hao Pengfei
Shuijin HuaShuijin Hua
Shuijin Hua
Yield prediction is an important agriculture management for crop policy making. In recent years, unmanned aerial vehicles (UAVs) and spectral sensor technology have been widely used in crop production. This study aims to evaluate the ability of UAVs equipped with spectral sensors to predict oilseed rape yield. In an experiment, RGB and hyperspectral images were captured using a UAV at the seedling (S1), budding (S2), flowering (S3), and pod (S4) stages in oilseed rape plants. Canopy reflectance and spectral indices of oilseed rape were extracted and calculated from the hyperspectral images. After correlation analysis and principal component analysis (PCA), input spectral indices were screened to build yield prediction models using random forest regression (RF), multiple linear regression (MLR), and support vector machine regression (SVM). The results showed that UAVs equipped with spectral sensors have great potential in predicting crop yield at a large scale. Machine learning approaches such as RF can improve the accuracy of yield models in comparison with traditional methods (e.g., MLR). The RF-based training model had the highest determination coefficient (R2) (0.925) and lowest relative root mean square error (RRMSE) (5.91%). In testing, the MLR-based model had the highest R2 (0.732) and lowest RRMSE (11.26%). Moreover, we found that S2 was the best stage for predicting oilseed rape yield compared with the other growth stages. This study demonstrates a relatively accurate prediction for crop yield and provides valuable insight for field crop management.

Verified
Journal Article
Open access
PDF file
HPHao Pengfei
Hao Pengfei
YRYun Ren
Yun Ren
BLBaogang Lin
Baogang Lin
KYKaige Yi
Kaige Yi
LHLan Huang
Lan Huang
Shuijin HuaShuijin Hua
Shuijin Hua
Nitrogen is essential for improving the seed oil yield of rapeseed (Brassica napus L.). However, the molecular mechanism by which increased nitrogen rates impact seed oil content is largely unknown. Therefore, a field experiment was conducted to determine how three nitrogen application rates (120, 240, and 360 kg ha−1) regulated seed oil content via transcriptomic analysis. The results showed that the seed yield and the protein and total N contents increased from N1 to N3, with average increases of 57.2%, 16.9%, and 79.5%, respectively. However, the seed oil content significantly decreased from N1 to N3, with an average decrease of 8.6%. These results were repeated over a number of years. The quantity of oil protein bodies observed under a transmission electron microscope was in accordance with the ultimate seed oil and protein contents. As the nitrogen application rate increased, a substantial number of genes involved in the photosynthesis, glycolysis, and phenylpropanoid biosynthesis pathways were up-regulated, as were TF families, such as AP2/ERF, MYB, and NAC. The newly identified genes were mainly involved in carbohydrate, lipid, and amino acid metabolism. Metabolic flux analysis showed that most of the genes involved in glycolysis and fatty acid biosynthesis had higher transcript levels in the early development stages. Our results provide new insights into the molecular regulation of rapeseed seed oil content through increased nitrogen application rates.

27 June 2022 in Plants
Verified
Journal Article
Open access
PDF file
YRYun Ren
Yun Ren
JZJianfang Zhu
Jianfang Zhu
HZHui Zhang
Hui Zhang
BLBaogang Lin
Baogang Lin
HPHao Pengfei
Hao Pengfei
Shuijin HuaShuijin Hua
Shuijin Hua
Delayed planting date of rapeseed is an important factor affecting seed yield. However, regulation of the leaf carbohydrate metabolism in rapeseed by a late planting date at the reproductive stage is scarcely investigated. A two-year field experiment was conducted to assess the effect of planting dates, including early (15 September), optimal (1 October), late (15 October), and very late (30 October), on leaf growth and carbohydrate biosynthetic and catabolic metabolism at the reproductive stage. The results showed that leaf dry matter decreased linearly on average from 7.48 to 0.62 g plant−1 with an early planting date, whereas it increased at first and peaked at 14 days after anthesis (DAA) with other planting dates. Leaf dry matter was the lowest at the very late planting date during the reproductive stage. For leaf chlorophyll content, rapeseed planted at an optimal date maximized at 14 DAA with an average content of 1.51 mg g−1 fresh weight, whereas it kept high and stable at a very late planting date after 28 DAA. For the carbohydrate catabolic system, acid and neutral invertase (AI and NI, respectively) showed higher activity before 14 DAA, whereas both sucrose synthase (SS) and starch phosphorylase (SP) showed higher activity after 14 DAA. For the carbohydrate biosynthetic system, the activity of sucrose phosphate synthase (SPS) was the highest at the late planting date after 14 DAA, whereas it was at the lowest at the very late planting date. However, the activity of ADP-glucose pyrophosphorylase (AGPase) at the late and very late planting dates was significantly higher than that of the early and optimal plant dates after 21 DAA, which is in accordance with the leaf total soluble sugar content, suggesting that leaf carbohydrate metabolism is governed by a biosynthetic system. The current study provides new insights on leaf carbohydrate metabolism regulation by late planting in rapeseed at the reproductive stage.

26 October 2023 in Antioxidants
Verified
Journal Article
Open access
PDF file
HPHao Pengfei
Hao Pengfei
BLBaogang Lin
Baogang Lin
YRYun Ren
Yun Ren
HHHao Hu
Hao Hu
WLWeidong Lou
Weidong Lou
Shuijin HuaShuijin Hua
Shuijin Hua
Rapeseed seeding dates are largely delayed under the rice–rape rotation system, but how rapeseeds adapt to the delayed environment remains unclear. Here, five seeding dates (20 October, 30 October, 10 November, 20 November and 30 November, T1 to T5) were set and the dynamic differences between two late-seeding-tolerant (LST) and two late-seeding-sensitive (LSS) rapeseed cultivars were investigated in a field experiment. The growth was significantly repressed and the foldchange (LST/LSS) of yield increased from 1.50-T1 to 2.64-T5 with the delay in seeding. Both LST cultivars showed higher plant coverage than the LSS cultivars according to visible/hyperspectral imaging and the vegetation index acquired from an unmanned aerial vehicle. Fluorescence imaging, DAB and NBT staining showed that the LSS cultivars suffered more stress damage than the LST cultivars. Antioxidant enzymes (SOD, POD, CAT, APX) and osmoregulation substances (proline, soluble sugar, soluble protein) were decreased with the delay in seeding, while the LST cultivar levels were higher than those of the LSS cultivars. A comparative analysis of transcriptomes and metabolomes showed that 55 pathways involving 123 differentially expressed genes (DEGs) and 107 differentially accumulated metabolites (DAMs) participated in late seeding tolerance regulation, while 39 pathways involving 60 DEGs and 68 DAMs were related to sensitivity. Levanbiose, α-isopropylmalate, s-ribosyl-L-homocysteine, lauroyl-CoA and argino-succinate were differentially accumulated in both cultivars, while genes including isocitrate dehydrogenase, pyruvate kinase, phosphoenolpyruvate carboxykinase and newgene_7532 were also largely regulated. This study revealed the dynamic regulation mechanisms of rapeseeds on late seeding conditions, which showed considerable potential for the genetic improvement of rapeseed.

19 June 2024 in Plants
Verified
Journal Article
Open access
PDF file
LHLan Huang
Lan Huang
YRYun Ren
Yun Ren
BLBaogang Lin
Baogang Lin
HPHao Pengfei
Hao Pengfei
KYKaige Yi
Kaige Yi
Shuijin HuaShuijin Hua
Shuijin Hua
Ogura cytoplasmic male sterility (CMS) is considered the rapeseed (Brassica napus L.) with the most potential to be utilized as a heterosis system worldwide, but it lacks sufficient restorers. In this study, root tip cell (RTC) mitotic and pollen mother cell (PMC) meiosis observations were compared to ensure the number of chromosomes and the formation of a chromosomal bridge using restorer lines R2000, CLR650, and Zhehuhong (a new restorer) as the experimental material. Further, molecular markers of exogenous chromosomal fragments were detected and the sequence and expression differences of restorer genes in the three lines were determined to identify the distinctive characteristics of Zhehuhong. The results showed that the number of chromosomes in Zhehuhong was stable (2n = 38), indicating that the exogenous radish chromosome segment had been integrated into the chromosome of Zhehuhong. Molecular marker detection revealed that Zhehuhong was detected at most loci, with only the RMA05 locus being missed. The exogenous radish chromosome segment of Zhehuhong differed from R2000 and CLR650. The pollen mother cells of Zhehuhong showed chromosome lagging in the meiotic metaphase I, meiotic anaphase I, and meiotic anaphase II, which was consistent with R2000 and CLR650. The restorer gene PPRB in Zhehuhong had 85 SNPs compared with R2000 and 119 SNPs compared with CLR650, indicating the distinctive characteristic of PPRB in Zhehuhong. In terms of the spatial expression of PPRB, the highest level was detected in the anthers in the three restorer lines. In addition, in terms of temporal expression, the PPRB gene expression of Zhehuhong was highest at a bud length of 4 mm. Our results clearly indicated that Zhehuhong is a new restorer line for the Ogura CMS system, which can be used further in rapeseed heterosis utilization.

10 August 2026 in Antioxidants
Verified
Journal Article
Open access
PDF file
CHChaochao He
Chaochao He
ZZzhou zhongjing
zhou zhongjing
KYKaige Yi
Kaige Yi
YJYupeng Jiang
Yupeng Jiang
XWXianling Wang
Xianling Wang
SHShuijin Hua
Shuijin Hua
Haloxyfop-P-methyl (HPM) is widely used for grass weed control in oilseed rape production. However, whether its residues affect subsequent seed germination and the underlying mechanisms remains unclear. In this study, seeds harvested from HPM-treated fields exhibited a significantly reduced germination rate of 36.5%, compared with 100% in the control group, accompanied by abnormal cell morphology. Residue analysis revealed an HPM concentration of 3.36 mg kg−1 in the treated seeds, exceeding the Chinese maximum residue limit (MRL) of 3 mg kg−1 (GB 2763). Given that herbicides often induce oxidative stress, we measured a range of antioxidant markers (H2O2, MDA, SOD, POD, GSH, GSSG, AsA, and DHA) during germination (12 h and 24 h) but detected no significant changes, which did not support oxidative stress as the primary mechanism during this phase. Relative electrical conductivity measurements further indicated that membrane integrity was already compromised in dry seeds, suggesting that oxidative injury—if it occurred—may have taken place during seed development rather than during germination. To elucidate the molecular basis, we performed transcriptomic, metabolomic, and lipidomic analyses, which revealed significant downregulation of fatty acid biosynthesis genes and marked alterations in the lipidome profile. Collectively, our multi-stage investigation demonstrates that HPM residue accumulation is associated with impaired seed germination, primarily through metabolic disruption of lipid reserves rather than oxidative damage during germination, highlighting a non-target phytotoxic effect of this herbicide on the crop itself. These findings provide a theoretical basis for understanding the potential toxicity of persistent HPM residues in rapeseed, with implications for pesticide environmental risk assessment and the safe production of rapeseed.