Chemical reactions are responsible for information processing in living organisms. It is believed that the basic features of biological computing activity are reflected by a reaction–diffusion medium. We illustrate the ideas of chemical information processing considering the Belousov–Zhabotinsky (BZ) reaction and its photosensitive variant. The computational universality of information processing is demonstrated. For different methods of information coding constructions of the simplest signal processing devices are described. The function performed by a particular device is determined by the geometrical structure of oscillatory (or of excitable) and non-excitable regions of the medium. In a living organism, the brain is created as a self-grown structure of interacting nonlinear elements and reaches its functionality as the result of learning. We discuss whether such a strategy can be adopted for generation of chemical information processing devices. Recent studies have shown that lipid-covered droplets containing solution of reagents of BZ reaction can be transported by a flowing oil. Therefore, structures of droplets can be spontaneously formed at specific non-equilibrium conditions, for example forced by flows in a microfluidic reactor. We describe how to introduce information to a droplet structure, track the information flow inside it and optimize medium evolution to achieve the maximum reliability. Applications of droplet structures for classification tasks are discussed.
27 August 2015 in International Journal of Neural Systems
We report a microfluidic system for individually tailored generation and incubation of core–shell liquid structures with multiple cores that chemically communicate with each other via lipid membranes. We encapsulate an oscillating reaction–diffusion Belousov–Zhabotinsky (BZ) medium inside the aqueous droplets and study the propagation of chemical wave-fronts through the membranes. We further encapsulate the sets of interconnected BZ-droplets inside oil–lipid shells in order to i) chemically isolate the structures and ii) confine them via tunable capillary forces which leads to self-assembly of predesigned topologies. We observe that doublets (pairs) of droplets encapsulated in the shell exhibit oscillation patterns that evolve in time. We collect statistical data from tens of doublets all created under precisely controlled, almost identical conditions from which we conclude that the different types of transitions between the patterns depend on the relative volumes of the droplets within a chemically coupled pair. With this we show that the volume of the compartment is an important control parameter in designing chemical networks, a feature previously appreciated only by theory. Our system not only allows for new insights into the dynamics of geometrically complex and interacting chemical systems but is also suitable for generating autonomous chemically interconnected microstructures with possible future use, e.g., as smart biosensors or drug-release capsules.
7 February 2017 in Physical Chemistry Chemical Physics
The information storing potential of droplets, in which an oscillatory, photosensitive Belousov–Zhabotinsky (BZ) reaction proceeds, is investigated experimentally. We consider coupled oscillations in pairs and triplets of droplets. Droplets are surrounded by a solution of lipids in decane. Oscillations synchronize via diffusion of an activator through a lipid bilayer. The reaction in each droplet can be individually controlled by illumination with blue light through an optical fiber. We found that in pairs of BZ droplets, only the in-phase and the forcing oscillation modes are stable, however switching between these modes is not reliable. In triplets of droplets, switching between two different, stable rotational modes (clockwise and anticlockwise) can be easily implemented. Therefore, such a system is an excellent candidate for a light controlled, reliable, one bit chemical memory unit.
Interference of waves is important and used in many areas of science and technology but does not extend to static magnetic fields which lack the wave structure. On the other hand, magnetic fields can be spatially modulated using microstructured materials comprising magnetic and non-magnetic domains. Here, we show that when such spatial modulation is coupled to the dynamics of magnetic particles, it can give rise to interference-like patterns. These patterns are imprinted into thin polymer films by overlaying “stamps” presenting periodic arrays of magnetic and nonmagnetic regions. The structures that emerge from such a superposition are sensitive to any motions of the stamps, can depend on the history of these motions, can produce features significantly smaller than those in the stamps, and can be either planar or three-dimensional.