Evgeniya Sidenko

Dr. Evgeniya Sidenko

orcid

Research Focus & Metrics

Academic Career Length

7Years (2020-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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26 March 2020 in Biomolecules
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Journal Article
Open access
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IKIrina V. Kondakova
Irina V. Kondakova
ESElena Sereda
Elena Sereda
ESEvgeniya Sidenko
Evgeniya Sidenko
TATatiana M. Astakhova
Tatiana M. Astakhova
LZLiudmila Zakharova
Liudmila Zakharova
NSNatalia Sharova
Natalia Sharova
This review provides information on the structure of estrogen receptors (ERs), their localization and functions in mammalian cells. Additionally, the structure of proteasomes and mechanisms of protein ubiquitination and cleavage are described. According to the modern concept, the ubiquitin proteasome system (UPS) is involved in the regulation of the activity of ERs in several ways. First, UPS performs the ubiquitination of ERs with a change in their functional activity. Second, UPS degrades ERs and their transcriptional regulators. Third, UPS affects the expression of ER genes. In addition, the opportunity of the regulation of proteasome functioning by ERs—in particular, the expression of immune proteasomes—is discussed. Understanding the complex mechanisms underlying the regulation of ERs and proteasomes has great prospects for the development of new therapeutic agents that can make a significant contribution to the treatment of diseases associated with the impaired function of these biomolecules.
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26 December 2024 in International Journal of Oral and Maxillofacial Surgery
Verified
Journal Article
Closed access
EPE.A. Prostakishina
E.A. Prostakishina
ESEvgeniya Sidenko
Evgeniya Sidenko
EKElena Kolegova
Elena Kolegova
MPMarina Patysheva
Marina Patysheva
GKG.A. Kononova
G.A. Kononova
ECE.L. Choinzonov
E.L. Choinzonov

1 July 2022 in Translational Breast Cancer Research
Verified
Journal Article
Open access
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ESElena Sereda
Elena Sereda
EKElena Kolegova
Elena Kolegova
GKGelena V. Kakurina
Gelena V. Kakurina
DKDmitry Korshunov
Dmitry Korshunov
ESEvgeniya Sidenko
Evgeniya Sidenko
IKIrina V. Kondakova
Irina V. Kondakova
Original Article Five-year survival in luminal breast cancer patients: relation with intratumoral activity of proteasomes Elena E. Sereda, Elena. S. Kolegova, Gelena V. Kakurina, Dmitriy A. Korshunov, Evgenia A. Sidenko, Artem V. Doroshenko, Elena M. Slonimskaya, Irina V. Kondakova

6 January 2025 in Cancers
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Journal Article
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IKIrina V. Kondakova
Irina V. Kondakova
ESElena Sereda
Elena Sereda
ESEvgeniya Sidenko
Evgeniya Sidenko
SVSergey V Vtorushin
Sergey V Vtorushin
VVValeria Vedernikova
Valeria Vedernikova
VKVadim Karpov
Vadim Karpov
Background: Proteasomes degrade intracellular proteins. Different proteasome forms were identified. Proteasome inhibitors are used in cancer therapy, and novel drugs directed to specific proteasome forms are developed. Breast cancer (BC) therapy depends on the subtype of the tumor, determined by the expression level of Ki67, HER-2, estrogen and progesterone receptors. Relationships between the presence of specific proteasome forms and proteins that determine the BC subtype remain unclear. Here, using gene expression data in 19,145 tumor samples from 144 datasets and tissues from 159 patients with different subtypes of BC, we investigated the association between the activity and expression of proteasomes and levels of BC subtype markers. Methods: Bioinformatic analysis of proteasome subunit (PSMB1-10) gene expression in BC was performed. Proteasome heterogeneity in BC cell lines was investigated by qPCR. By Western blotting, proteasome composition was assessed in cells and patient tissue lysates. Proteasome activities were studied using fluorogenic substrates. BC molecular subtypes were determined by immunohistochemistry. Results: BC subtypes demonstrate differing proteasome subunit expression pattern and strong PSMB8-10 co-correlation in tumors. A significant increase in chymotrypsin- and caspase-like proteasome activities in BC compared to adjacent tissues was revealed. The subunit composition of proteasomes in tumor tissues of BC subtypes varied. Regression analysis demonstrated a positive correlation between proteasome activities and the expression of Ki67, estrogen receptors and progesterone receptors. Conclusion: BC subtypes demonstrate differences within the proteasome pool. Correlations between the proteasome activity, hormone receptors and Ki67 indicate possible mutual influence. Obtained results facilitate development of novel drug combinations for BC therapy.

12 August 2024 in Almanac of Clinical Medicine
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Journal Article
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NYNatalia v Yunusova
Natalia v Yunusova
DSDmitry Andreevich Svarovsky
Dmitry Andreevich Svarovsky
AKArtem I. Konovalov
Artem I. Konovalov
DKDmitry Kostromitskiy
Dmitry Kostromitskiy
IKIrina V. Kondakova
Irina V. Kondakova
КНКостромицкий Дмитрий Николаевич
Костромицкий Дмитрий Николаевич
Background: Overweight and especially obesity are associated with the risk of the development and progression of colorectal cancer. It can be assumed that there are multifaceted interactions between the tumor and adipose tissue during anti-tumor treatment. Cancer cells secrete exosomes, extracellular vesicles affecting the microenvironment of the tumor and promoting its progression or regression. The presence of transcription/translation/folding factors (heat shock proteins (HSPs), matrix metalloproteinases (MMPs) and their tissue inhibitors (TIMPs) in exosomes secreted by irradiated cells and cells exposed to hyperthermia, indicates the cell adaptation to the thermal and radiation stress. Aim: To analyze the MMPs, TIMP1, and HSPs on CD9-positive (CD9+) exosomes, as well as on exosomes of adipocytic origin (FABP4+) in rectal cancer patients with overweight/obesity under thermoradiochemotherapy (TRCT) and their association with the immediate treatment efficacy. Methods: Since 2021, 20 patients (of those 8 men; median age 59.0 [52.0; 63.0] years, median body mass index 29.6 [28.5; 33.1] kg/m2) with morphologically verified rectal cancer (T3-4N0M0 and T3-4N1M0, differentiation grade G1–G3) have been participating in the study. They were treated with TRCT: external gamma therapy (2 Gy, 1 fraction/day, 5 days/week, total focal dose 54 Gy), chemotherapy with capecitabine (825 mg/m2 twice daily) combined with local hyperthermia (42–44 °C, 60 min, 3 times/week, 10 sessions). The TRCT efficacy was assessed by RECIST 1.1 and ESGAR criteria. Blood samples for exosomes were taken from the patients at baseline (point 1), in the middle of the treatment course (point 2), at 6 to 10 weeks after the end of TRCT (point 3), and at 6 months after point 1 (point 4). Small extracellular vesicles were isolated from plasma by ultrafiltration with double ultracentrifugation. The isolated exosomes were characterized by transmission electronic microscopy, flow cytometry and nanoparticle trajectory analysis (NTA). Results: TRCT resulted in complete tumor regression in 13/20 of the rectal cancer patients and partial regression or stabilization in 7/20. Four subpopulations of CD9+ and FABP4+ exosomes associated with the TRCT efficacy were identified (CD9+MMP2+, СD9+MMP2+9+TIMP1+, СD9+MMP2+9+TIMP1-, and FABP4+MMP2+9-TIMP1+). Compared to the CD9+ exosomes, the adipocytic vesicles had higher MMP2 expression (p = 0.026); however, the adipocyte vesicles subpopulation were virtually free of vesicles with combined MMP2 and MMP9 gelatinase expression. The HSPs expression by circulating exosomes at various TRCT steps was associated neither with direct treatment efficacy nor with the vesicle type. Conclusion: The expression of MMPs and TIMP1 on CD9+ and FABP4+ exosomes is associated with TRCT efficacy. In the future, vesicular markers could be used to build prognostic models, to identify patient groups with an unfavorable prognosis, and to personalize treatment and follow-up.

30 June 2023 in Voprosy onkologii
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Journal Article
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НЮНаталья Юнусова
Наталья Юнусова
ДСДмитрий Сваровский
Дмитрий Сваровский
АКАртем Коновалов
Артем Коновалов
ESEvgeniya Sidenko
Evgeniya Sidenko
ЖСЖанна Старцева
Жанна Старцева
Особый интерес вызывают исследования по применению дистанционной лучевой терапии или химиолучевой терапии в сочетании с локальной гипертермией, результаты которых свидетельствуют о повышении непосредственной эффективности лучевой терапии за счет выраженной регрессии опухоли, а также увеличении длительности безрецидивного периода для ряда локализаций. Молекулярные механизмы эффективности локальной гипертермии в составе комбинированного лечения у больных злокачественными новообразованиями с метаболическими нарушениями недостаточно изучены. Эти механизмы могут быть ассоциированы с изменениями на уровне клетки (особенности системы репарации ДНК в опухоли при ожирении; miRNA в опухоли, ассоциированные с терморадиорезистентностью на фоне ожирения; стволовые клетки в опухоли на фоне ожирения, циркулирующие опухолевые клетки), а также с внеклеточными факторами, которые в свою очередь можно разделить на растворимые компоненты биологических жидкостей (например, плазмы крови, асцитической жидкости) и внеклеточные везикулы. Проблемы при проведении терапии больных злокачественными новообразованиями с метаболическими нарушениями связаны с отсутствием клинических рекомендаций по использованию локальной гипертермии, с недостаточной разработанностью методических подходов (способов и техник нагрева, длительностью сеанса, необходимыми температурам и количеством процедур), а также с не изученностью факторов прогноза эффективности комбинированного лечения.