Mohammed  Alahmdi

Dr. Mohammed Alahmdi

orcid

Research Focus & Metrics

Academic Career Length

6Years (2021-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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30 September 2022 in Molecules
Verified
Journal Article
Open access
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RHRafaqat Hussain
Rafaqat Hussain
Shahid IqbalShahid Iqbal
Shahid Iqbal
MSMazloom Shah
Mazloom Shah
Wajid RehmanWajid Rehman
Wajid Rehman
SKShoaib Khan
Shoaib Khan
Hashem AlsaabHashem Alsaab
Hashem Alsaab
In this study, hybrid analogs of benzimidazole containing a thiazole moiety (1–17) were afforded and then tested for their ability to inhibit α-amylase and α-glucosidase when compared to acarbose as a standard drug. The recently available analogs showed a wide variety of inhibitory potentials that ranged between 1.31 ± 0.05 and 38.60 ± 0.70 µM (against α-amylase) and between 2.71 ± 0.10 and 42.31 ± 0.70 µM (against α-glucosidase) under the positive control of acarbose (IC50 = 10.30 ± 0.20 µM against α-amylase) (IC50 = 9.80 ± 0.20 µM against α-glucosidase). A structure–activity relationship (SAR) study was carried out for all analogs based on substitution patterns around both rings B and C respectively. It was concluded from the SAR study that analogs bearing either substituent(s) of smaller size (−F and Cl) or substituent(s) capable of forming hydrogen bonding (−OH) with the catalytic residues of targeted enzymes enhanced the inhibitory potentials. Therefore, analogs 2 (bearing meta-fluoro substitution), 3 (having para-fluoro substitution) and 4 (with ortho-fluoro group) showed enhanced potency when evaluated against standard acarbose drug with IC50 values of 4.10 ± 0.10, 1.30 ± 0.05 and 1.90 ± 0.10 (against α-amylase) and 5.60 ± 0.10, 2.70 ± 0.10 and 2.90 ± 0.10 µM (against α-glucosidase), correspondingly. On the other hand, analogs bearing substituent(s) of either a bulky nature (−Br) or that are incapable of forming hydrogen bonds (−CH3) were found to lower the inhibitory potentials. In order to investigate the binding sites for synthetic analogs and how they interact with the active areas of both targeted enzymes, molecular docking studies were also conducted on the potent analogs. The results showed that these analogs adopted many important interactions with the active areas of enzymes. The precise structure of the newly synthesized compounds was confirmed using several spectroscopic techniques as NMR and HREI-MS.

29 October 2022 in Molecules
Verified
Journal Article
Open access
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SKShoaib Khan
Shoaib Khan
Shahid IqbalShahid Iqbal
Shahid Iqbal
RHRafaqat Hussain
Rafaqat Hussain
FRFazal Rahim
Fazal Rahim
MSMazloom Shah
Mazloom Shah
AFAbd-ElAziem Farouk
Abd-ElAziem Farouk
The current study was conducted to obtain hybrid analogues of indole-based thiadiazole derivatives (1–16) in which a number of reaction steps were involved. To examine their biological activity in the presence of the reference drug Donepezil (0.21 ± 0.12 and 0.30 ± 0.32 M, respectively), the inhibitory potentials of AChE and BuChE were determined for these compounds. Different substituted derivatives showing a varied range of inhibitory profiles, when compared to the reference drug, analogue 8 was shown to have potent activity, with IC50 values for AchE 0.15 ± 0.050 M and BuChE 0.20 ± 0.10, respectively, while other substituted compounds displayed good to moderate potentials. Varied spectroscopic techniques including 1H, 13CNMR and HREI-MS were used to identify the basic skeleton of these compounds. Furthermore, all analogues have a known structure–activity relationship (SAR), and molecular docking investigations have verified the binding interactions of molecule to the active site of enzymes.

4 October 2022 in Molecules
Verified
Journal Article
Open access
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SMSundas Mumtaz
Sundas Mumtaz
Shahid IqbalShahid Iqbal
Shahid Iqbal
MSMazloom Shah
Mazloom Shah
RHRafaqat Hussain
Rafaqat Hussain
DRDr. Fazal Rahim
Dr. Fazal Rahim
MAMohammed Alahmdi
Mohammed Alahmdi
Twenty-four analogs based on triazinoindole bearing benzimidazole/benzoxazole moieties (1–25) were synthesized. Utilizing a variety of spectroscopic methods, including 1H-, 13C-NMR, and HREI-MS, the newly afforded compounds (1–25) were analyzed. The synthesized analogs were tested against urease enzyme (in vitro) as compared to the standard thiourea drug. All triazinoindole-based benzimidazole/benzoxazole analogs (1–25) exhibited moderate to excellent inhibition profiles, having IC50 values of 0.20 ± 0.01 to 36.20 ± 0.70 μM when evaluated under the positive control of thiourea as a standard drug. To better understand the structure–activity relationship, the synthesized compounds were split into two groups, “A” and “B.” Among category “A” analogs, analogs 8 (bearing tri-hydroxy substitutions at the 2,4,6-position of aryl ring C) and 5 (bearing di-hydroxy substitutions at the 3,4-position of aryl ring C) emerged as the most potent inhibitors of urease enzyme and displayed many times more potency than a standard thiourea drug. Besides that, analog 22 (which holds di-hydroxy substitutions at the 2,3-position of the aryl ring) and analog 23 (bearing ortho-fluoro substitution) showed ten-fold-enhanced inhibitory potential compared to standard thiourea among category “B” analogs. Molecular docking studies on the active analogs of each category were performed; the results obtained revealed that the presence of hydroxy and fluoro-substitutions on different positions of aryl ring C play a pivotal role in binding interactions with the active site of the targeted urease enzyme.

19 January 2023 in ChemistrySelect
Verified
Journal Article
Open access
Adeniyi Thompson AdewumiAdeniyi Thompson Adewumi
Adeniyi Thompson Adewumi
WOWande M. Oluyemi
Wande M. Oluyemi
YAYemi A. Adekunle
Yemi A. Adekunle
NANonhlanhla Adewumi
Nonhlanhla Adewumi
MAMohammed Alahmdi
Mohammed Alahmdi
NANader E. Abo‐Dya
Nader E. Abo‐Dya
Mycobacterium tuberculosis β‐ketoacyl‐ACP synthase I (KasA) involves in mycolic acid biosynthesis for cell wall maintenance; hence, it is a critical target in TB drug design. Thiolactomycin (TLM) and derivatives are the known standard KasA enzyme activity inhibitors. However, TLM analogues have poor activity against KasA protein. Indazole sulphonamide chemotype (JSF‐3285/JFX) was recently reported as a promising KasA enzyme inhibitor. JSF‐3285 mechanism is unclear; thus, it provides a means for designing KasA inhibitors. This study unfolds six hits as unprecedented KasA inhibitors. The inhibitory mechanisms of the screened compounds were investigated and compared with a standard inhibitor (TLM) using integrated molecular informatics and dynamics. JFX, M1, M2, and M5 molecules showed stronger interactions with KasA, having binding energy (kcal/mol) of −44.05, −41.52, −39.51, and −35.9, respectively, against −11.69 for TLM. Molecules showed good predicted inhibitory constants, drug‐likeness, ADME, and synthetic accessibility. KasA complex C‐α atoms RMSD and RMSF showed stable and erratic fluctuations compared to apo KasA. The findings provide potential antimycobacterial lead‐like molecules for future TB drugs.

30 March 2023 in Journal of Molecular Modeling
Verified
Journal Article
Closed access
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AIAbdul Rashid Issahaku
Abdul Rashid Issahaku
SMSamukelisiwe Minenhle Mncube
Samukelisiwe Minenhle Mncube
CAClement Agoni
Clement Agoni
SKSamuel K. Kwofie
Samuel K. Kwofie
MAMohammed Alahmdi
Mohammed Alahmdi
Mahmoud SolimanMahmoud Soliman
Mahmoud Soliman

30 January 2023 in Ceramics International
Verified
Journal Article
Closed access
SKSyed Khasim
Syed Khasim
SDSyed Gulam Dastager
Syed Gulam Dastager
MAMohammed Alahmdi
Mohammed Alahmdi
THTaymour Hamdallah
Taymour Hamdallah
PCPanneerselvam Chellasamy
Panneerselvam Chellasamy
MMMohammad Basha Makandar
Mohammad Basha Makandar