Marisol Ibarra-Ramírez

Dr. Marisol Ibarra-Ramírez

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Research Focus & Metrics

Academic Career Length

13Years (2014-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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14 December 2020 in American Journal of Medical Genetics Part C: Seminars in Medical Genetics
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IOIêda Maria Orioli
Iêda Maria Orioli
HDHelen Dolk
Helen Dolk
JLJorge Lopez‐Camelo
Jorge Lopez‐Camelo
BGBoris Groisman
Boris Groisman
ABAdriana Benavides‐Lara
Adriana Benavides‐Lara
RGReLAMC Group
ReLAMC Group

12 March 2020 in Molecular Genetics & Genomic Medicine
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VSVictor Michael Salinas-Torres
Victor Michael Salinas-Torres
Hugo L. Gallardo-BlancoHugo L. Gallardo-Blanco
Hugo L. Gallardo-Blanco
RSRafael A. Salinas‐Torres
Rafael A. Salinas‐Torres
RCRicardo M. Cerda‐Flores
Ricardo M. Cerda‐Flores
JLJosé J. Lugo‐Trampe
José J. Lugo‐Trampe
LVLaura E. Martínez de Villarreal
Laura E. Martínez de Villarreal
Background: Genetic association studies for gastroschisis have highlighted several candidate variants. However, genetic basis in gastroschisis from noninvestigated heritable factors could provide new insights into the human biology for this birth defect. We aim to identify novel gastroschisis susceptibility variants by employing whole exome sequencing (WES) in a Mexican family with recurrence of gastroschisis.Methods: We employed WES in two affected half‐sisters with gastroschisis, mother, and father of the proband. Additionally, functional bioinformatics analysis was based on SVS–PhoRank and Ensembl–Variant Effect Predictor. The latter assessed the potentially deleterious effects (high, moderate, low, or modifier impact) from exome variants based on SIFT, PolyPhen, dbNSFP, Condel, LoFtool, MaxEntScan, and BLOSUM62 algorithms. The analysis was based on the Human Genome annotation, GRCh37/hg19. Candidate genes were prioritized and manually curated based on significant phenotypic relevance (SVS–PhoRank) and functional properties (Ensembl–Variant Effect Predictor). Functional enrichment analysis was performed using ToppGene Suite, including a manual curation of significant Gene Ontology (GO) biological processes from functional similarity analysis of candidate genes.Results: No single gene‐disrupting variant was identified. Instead, 428 heterozygous variations were identified for which SPATA17, PDE4DIP, CFAP65, ALPP, ZNF717, OR4C3, MAP2K3, TLR8, and UBE2NL were predicted as high impact in both cases, mother, and father of the proband. PLOD1, COL6A3, FGFRL1, HHIP, SGCD, RAPGEF1, PKD1, ZFHX3, BCAS3, EVPL, CEACAM5, and KLK14 were segregated among both cases and mother. Multiple interacting background modifiers may regulate gastroschisis susceptibility. These candidate genes highlight a role for development of blood vessel, circulatory system, muscle structure, epithelium, and epidermis, regulation of cell junction assembly, biological/cell adhesion, detection/response to endogenous stimulus, regulation of cytokine biosynthetic process, response to growth factor, postreplication repair/protein K63‐linked ubiquitination, protein‐containing complex assembly, and regulation of transcription DNA‐templated.Conclusion: Considering the likely gene‐disrupting prediction results and similar biological pattern of mechanisms, we propose a joint “multifactorial model” in gastroschisis pathogenesis.

1 January 2016 in Medicina Universitaria
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MIMarisol Ibarra-Ramírez
Marisol Ibarra-Ramírez
LML.E. Martínez-De-Villarreal
L.E. Martínez-De-Villarreal

21 July 2023 in Journal of Pediatric Genetics
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MIMarisol Ibarra-Ramírez
Marisol Ibarra-Ramírez
LCLuis Daniel Campos-Acevedo
Luis Daniel Campos-Acevedo
LVLaura E. Martínez de Villarreal
Laura E. Martínez de Villarreal
Turner syndrome (TS) is caused by the total or partial loss of the second sex chromosome; it occurs in 1 every 2,500–3,000 live births. The clinical phenotype is highly variable and includes short stature and gonadal dysgenesis. In 1959, the chromosomal origin of the syndrome was recognized; patients had 45 chromosomes with a single X chromosome. TS presents numerical and structural abnormalities in the sex chromosomes, interestingly only 40% have a 45, X karyotype. The rest of the chromosomal abnormalities include mosaics, deletions of the short and long arms of the X chromosome, rings, and isochromosomes. Despite multiple studies to establish a relationship between the clinical characteristics and the different chromosomal variants in TS, a clear association cannot yet be established. Currently, different mechanisms involved in the phenotype have been explored. This review focuses to analyze the different chromosomal abnormalities and phenotypes in TS and discusses the possible mechanisms that lead to these abnormalities.

10 July 2020 in Scientific Reports
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MIMarisol Ibarra-Ramírez
Marisol Ibarra-Ramírez
GCGeovana Calvo-Anguiano
Geovana Calvo-Anguiano
JLJosé de Jesús Lugo-Trampe
José de Jesús Lugo-Trampe
LVLaura E. Martínez de Villarreal
Laura E. Martínez de Villarreal
DRDavid Rodríguez-Torres
David Rodríguez-Torres
PGPilar González-Peramato
Pilar González-Peramato
Klinefelter syndrome (KS) is the most common sex chromosome aneuploidy. A distinctive characteristic of KS is oligozoospermia. Despite multiple studies that have described the natural history of the degenerative process of germ cells in patients with KS, the molecular mechanisms that initiate this process are not well characterized. MicroRNA (miRNA)-mediated post-transcriptional control mechanisms have been increasingly recognized as important regulators of spermatogenesis; however, only a few studies have evaluated the role of miRNAs in the gonadal failure of these patients. Here, we describe a differential expression profile for the miRNAs in testicular tissue samples taken from KS patients. We analysed testicular tissue samples from 4 KS patients and 5 control patients (obstructive azoospermia) through next-generation sequencing, which can provide information about the mechanisms involved in the degeneration of germ cells. A distinctive differential expression profile was identified for 166 miRNAs in the KS patients: 66 were upregulated, and 100 were downregulated. An interactome analysis was performed for 7 of the upregulated and the 20 downregulated miRNAs. The results showed that the target genes are involved in the development, proliferation, and differentiation processes of spermatogenesis, which may explain their role in the development of infertility. This is the first report of a miRNA expression profile generated from testicular tissue samples of KS patients.

12 December 2017 in American Journal of Case Reports
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MIMarisol Ibarra-Ramírez
Marisol Ibarra-Ramírez
LCLuis Daniel Campos-Acevedo
Luis Daniel Campos-Acevedo
JLJose Lugo-Trampe
Jose Lugo-Trampe
LVLaura E. Martínez de Villarreal
Laura E. Martínez de Villarreal
Victor Martinez-GlezVictor Martinez-Glez
Victor Martinez-Glez
VRVictor L. Ruiz-Perez
Victor L. Ruiz-Perez
BACKGROUND:Ellis-van Creveld syndrome is an autosomal recessive chondro-ectodermal dysplasia characterized by disproportionate short stature, limb shortening, narrow chest, postaxial polydactyly and dysplastic nails and teeth. In addition, 60% of cas...