An Gram negative strain of S. maltophilia, indigenous to environments contaminated by Cr(VI) and identified by biochemical methods and 16S rRNA gene analysis, reduced chromate by 100%, 98–99% and 92% at concentrations in the 10–70, 80–300, and 500 mg/L range, respectively at pH 7 and temperature 37 °C. Increasing concentrations of Cr(VI) in the medium lowered the growth rate but could not be directly correlated with the amount of Cr(VI) reduced. The strain also exhibited multiple resistance to antibiotics and tolerance and resistance to various heavy metals (Ni, Zn and Cu), with the exception of Hg. Hexavalent chromium reduction was mainly associated with the soluble fraction of the cell evaluated with crude cell-free extracts. A protein of molecular weight around 25 kDa was detected on SDS-PAGE gel depending on the concentration of hexavalent chromium in the medium (0, 100 and 500 mg/L). In silico analysis in this contribution, revealed the presence of the chromate reductase gene ChrR in S. maltophilia, evidenced through a fragment of around 468 bp obtained experimentally. High Cr(VI) concentration resistance and high Cr(VI) reducing ability of the strain make it a suitable candidate for bioremediation.
Blastocystis spp. are among the few enteric parasites with a prevalence that can reach up to approximately 80% in communities of developing countries. This systematic review updates and summarizes available literature on the molecular prevalence and subtype distribution of Blastocystis spp. in Latin American people. This work follows the PRISMA (Preferred Reporting Items for Systematic Reviews and Meta-Analyses) guidelines. The literature revised covers from 1 January 2015 to 6 October 2023 in seven different scientific databases, and the material was selected through inclusion and exclusion criteria. According to data found in the 36 selected articles, the prevalence of Blastocystis spp. in Latin America ranged between 5.8% (Bolivian rural communities) and 94.0% (Colombian general public). Generally, genomic DNA was extracted from approximately 200 mg fecal sediments using commercial kits, such as the QIAamp Stool Mini Kit (QIAGEN, Hilden, Germany) or the Norgen Stool DNA Isolation Kit (Norgen Biotek Corporation, Thorold, ON, Canada). Subtype-specific primers (such as the couple of primers BhRDr–RD5) developed from unique sequences of the SSU rRNA gene were applied to Blastocystis subtyping. Ten specific subtypes (STs) were found as well as various mixed infections, and the most circulating Blastocystis STs were in the order ST3, ST1, ST2, and ST4. The most recent data about Blastocystis spp. molecular epidemiology and the STs in communities of Latin America are limited to studies from specific countries. Novel scientific data from the other countries are required to obtain a complete picture and truly understand the distribution and prevalence of Blastocystis spp. and the STs.
FimH is a type I fimbria of uropathogenic Escherichia coli (UPEC), recognized for its ability to adhere and infect epithelial urinary tissue. Due to its role in the virulence of UPEC, several therapeutic strategies have focused on the study of FimH, including vaccines, mannosides, and molecules that inhibit their assembly. This work has focused on the ability of a set of monosubstituted and disubstituted phenyl mannosides to inhibit FimH. To determine the 3D structure of FimH for our in silico studies, we obtained fifteen sequences by PCR amplification of the fimH gene from 102 UPEC isolates. The fimH sequences in BLAST had a high homology (97–100%) to our UPEC fimH sequences. A search for the three-dimensional crystallographic structure of FimH proteins in the PDB server showed that proteins 4X5P and 4XO9 were found in 10 of the 15 isolates, presenting a 67% influx among our UPEC isolates. We focused on these two proteins to study the stability, free energy, and the interactions with different mannoside ligands. We found that the interactions with the residues of aspartic acid (ASP 54) and glutamine (GLN 133) were significant to the binding stability. The ligands assessed demonstrated high binding affinity and stability with the lectin domain of FimH proteins during the molecular dynamic simulations, based on MM-PBSA analysis. Therefore, our results suggest the potential utility of phenyl mannoside derivatives as FimH inhibitors to mitigate urinary tract infections produced by UPEC; thus, decreasing colonization, disease burden, and the costs of medical care.
Azo dyes are categorized as toxigenic colorants, and the untreated discharge of effluents containing these compounds poses serious risks to both the environment and human health. Therefore, the objective of this study was to isolate and characterize an Enterococcus hirae Alf123 strain, obtained from beach sand, with the ability to degrade the azo dyes methyl orange and aniline red, to evaluate its decolorization capacity, and to propose a possible degradation pathway for both dyes. The bacterial strain was isolated from beach sand samples using selective culture media, and its identity was confirmed through biochemical tests, tuf gene amplification, and 16S rRNA gene sequencing. Decolorization assays were carried out using various dye concentrations. In addition, the activity of several enzymes laccases, lignin peroxidase, manganese peroxidase, and dioxygenases was evaluated, and spectroscopic analyses (UV–Vis and FT-IR) were employed to monitor structural changes in the dyes during degradation. The Alf123 strain achieved complete decolorization of methyl orange and aniline red at concentrations up to 200 mg/L and maintained activity at concentrations as high as 500 mg/L. Lignin peroxidase was the most efficient enzyme, reaching decolorization rates of 47.43% for methyl orange and 33.98% for aniline red, followed by manganese peroxidase with rates of 27.38% and 20.02%, respectively. Based on experimental results and literature review, a possible degradation mechanism and metabolic pathway used by E. hirae Alf123 strain for both dyes were proposed.
Silver nanoparticles were biosynthesized using the culture supernatant of Staphylococcus sp. YRA, a strain isolated from Colombian mining sediments. Synthesis was optimized at 1 mM AgNO3, pH 7, 40 °C and 7 μg/mL extract, producing spherical, protein-capped AgNPs with primary sizes in the tens-of-nanometers range (~35–90 nm by SEM), while DLS indicated larger hydrodynamic diameters (~250–320 nm) consistent with aggregation in suspension (ζ-potential −16.6 mV). These nanoparticles remained stable over 6 months. Characterization by UV–Vis, SEM, AFM, EDS and FTIR confirmed extracellular protein-mediated reduction and capping. The AgNPs showed antibacterial activity against multidrug-resistant clinical isolates (Staphylococcus aureus, Escherichia coli, Klebsiella pneumoniae, Salmonella bongori, Enterococcus spp.), with inhibition zones of 8–16 mm at 400–1000 μg/mL. Biofilm formation was reduced by >50% at 700 μg/mL in both Gram-positive and Gram-negative strains. In Phaseolus vulgaris (P. vulgaris), low concentrations (5–100 μg/mL) increased growth and chlorophyll content, while 500 μg/mL caused moderate inhibition. FTIR analysis identified amide and thiol groups from bacterial enzymes as capping agents. These results suggest Staphylococcus sp. YRA as a bacterial platform for AgNPs production with antibiofilm activity against MDR pathogens and acceptable phytotoxicity profile for potential applications.
2 September 2023 in Iranian Journal of Microbiology
Background and Objectives: Extraintestinal pathogenic Escherichia coli (ExPEC) is a recently recognized and highly diverse pathotype of E. coli. Its significance as a pathogen has increased due to the emergence of hypervirulent and multi- drug-resistant (MDR) strains. The aim of this study was to characterize ExPEC isolates from humans based on their phylo- genetic group, virulence factor profile, and antimicrobial susceptibility. Materials and Methods: The isolates were collected from patients with extraintestinal infections caused by E. coli, includ- ing urinary tract infections, bacteremia, and surgical site infections. The E. coli phylogenetic groups were determined using multiplex PCR. Additionally, the isolates were evaluated for their biofilm-forming abilities, susceptibility to antimicrobial agents, and presence of virulence genes. Results: In this study, the isolates were classified into four phylogenetic groups: A (48.3%), B2 (25.8%), D (19.35%), and B1 (6.45%). All isolates exhibited at least one of the ten analyzed virulence factors. However, there was no direct evidence linking a specific phylogenetic group to a particular virulence factor. Nevertheless, the presence of the fimH, fyuA, ompT, traT, and kpsMTII virulence genes was correlated with the production of strong biofilms, multidrug resistance (MDR), and the production of alpha hemolysin. Conclusion: This study provides a description of the phylogenetic groups in ExPEC and their potential association with virulence factor profiles and antimicrobial susceptibility.