Pamoda B Ratnaweera

Prof. Pamoda B Ratnaweera

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Research Focus & Metrics

Academic Career Length

18Years (2009-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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15 November 2012 in Journal of Natural History
Verified
Journal Article
Closed access
MHMark S. Harvey
Mark S. Harvey
PRPamoda B Ratnaweera
Pamoda B Ratnaweera
PUPreethi V. Udagama
Preethi V. Udagama
MWMayuri R. Wijesinghe
Mayuri R. Wijesinghe
Most species of the Old World pseudoscorpion genus Megachernes are associated with mammals, either within their nests or in their pelage, whereas others are found in cave systems, usually in bat guano. The first Sri Lankan species of the genus, Megachernes kanneliyensis, is described from the fur of an endemic, threatened Sri Lankan mouse, Mus mayori pococki from the Kanneliya rainforest. The species is compared with other species of the genus. Host associations of all named and several unnamed species of Megachernes are reviewed, with two main habitat types, those found in mammal nests and in their pelage, and those found in bat guano. Based on similarities with Megachernes, Chiridiochernes is transferred to Lamprochernetinae as the spermathecae are T-shaped, the sole diagnostic feature of the subfamily.

10 July 2015 in BMC Complementary and Alternative Medicine
Verified
Journal Article
Open access
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PRPamoda B Ratnaweera
Pamoda B Ratnaweera
ESE. Dilip de Silva
E. Dilip de Silva
DWDavid E. Williams
David E. Williams
RARaymond Anderson
Raymond Anderson
Opuntia dillenii is an invasive plant well established in the harsh South-Eastern arid zone of Sri Lanka. Evidence suggests it is likely that the endophytic fungal populations of O. dillenii assist the host in overcoming biotic and abiotic stress by producing biologically active metabolites. With this in mind there is potential to discover novel natural products with useful biological activities from this hitherto poorly investigated source. Consequently, an investigation of the antimicrobial activities of the endophytes of O. dillenii, that occupies a unique ecological niche, may well provide useful leads in the discovery of new pharmaceuticals. Endophytic fungi were isolated from the surface sterilized cladodes and flowers of O. dillenii using several nutrient media and the antimicrobial activities were evaluated against three Gram-positive and two Gram-negative bacteria and Candida albicans. The two most bioactive fungi were identified by colony morphology and DNA sequencing. The secondary metabolite of the endophyte Fusarium sp. exhibiting the best activity was isolated via bioassay guided chromatography. The chemical structure was elucidated from the ESIMS and NMR spectroscopic data obtained for the active metabolite. The minimum inhibitory concentrations (MICs) of the active compound were determined. Eight endophytic fungi were isolated from O. dillenii and all except one showed antibacterial activities against at least one of the test bacteria. All extracts were inactive against C. albicans. The most bioactive fungus was identified as Fusarium sp. and the second most active as Aspergillus niger. The structure of the major antibacterial compound of the Fusarium sp. was shown to be the tetramic acid derivative, equisetin. The MIC’s for equisetin were 8 μg mL−1 against Bacillus subtilis, 16 μg mL−1 against Staphylococcus aureus and Methicillin Resistant Staphylococcus aureus (MRSA). O. dillenii, harbors several endophytic fungi capable of producing antimicrobial substances with selective antibacterial properties. By producing biologically active secondary metabolites, such as equisetin isolated from the endophytic Fusarium sp., the endophytic fungal population may be assisting the host to successfully withstand stressful environmental conditions. Further investigations on the secondary metabolites produced by these endophytes may provide additional drug leads.

2 January 2016 in Mycology
Verified
Journal Article
Open access
RDRanga K. Dissanayake
Ranga K. Dissanayake
PRPamoda B Ratnaweera
Pamoda B Ratnaweera
DWDavid E. Williams
David E. Williams
CWC. Dilrukshi Wijayarathne
C. Dilrukshi Wijayarathne
RWRavi L. C. Wijesundera
Ravi L. C. Wijesundera
ESE. Dilip de Silva
E. Dilip de Silva
Twenty distinct endophytic fungi were isolated from the surface-sterilized plant parts of Nymphaea nouchali and were identified using morphological and molecular techniques. At 300 µg/disc concentration, eight of the 20 fungal extracts exhibited antimicrobial activities against Staphylococcus aureus (ATCC 25923) and Bacillus cereus (ATCC 11778) while two within the eight showed activity against Pseudomonas aeruginosa (ATCC 9027) and Escherichia coli (ATCC 35218). Furthermore, investigation of the crude extract of Chaetomium globosum resulted in the isolation of two known cytochalasans, chaetoglobosin A and C, and their structures were elucidated and confirmed by mass and nuclear magnetic resonance (NMR) (1H, 13C, COSY, HSQC, HMBC and tROESY) spectral data. Chaetoglobosin A showed antibacterial activities against Bacillus subtilis (MIC 16 µg mL−1), Staphylococcus aureus (MIC 32 µg mL−1) and methicillin-resistant Staphylococcus aureus (MRSA, MIC 32 µg mL−1). This is the first study to report the isolation, identification and antimicrobial properties of endophytic fungi of N. nouchali in Sri Lanka.

26 August 2024 in Journal of Fungi
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Journal Article
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KMKumudu Kanchanamala Manathunga
Kumudu Kanchanamala Manathunga
NGNiranjan W Gunasekara
Niranjan W Gunasekara
MMMuditha K Meegahakumbura
Muditha K Meegahakumbura
PRPamoda B Ratnaweera
Pamoda B Ratnaweera
TFTurki Kh. Faraj
Turki Kh. Faraj
Dhanushka Nadeeshan WanasingheDhanushka Nadeeshan Wanasinghe
Dhanushka Nadeeshan Wanasinghe
The yield and quality of cultivated food crops are frequently compromised by the prevalent threat from fungal pathogens that can cause widespread damage in both the pre-harvest and post-harvest stages. This paper investigates the challenges posed by fungal pathogens to the sustainability and yield of essential food crops, leading to significant economic and food security repercussions. The paper critiques the long-standing reliance on synthetic fungicides, emphasizing the environmental and health concerns arising from their widespread and occasionally inappropriate use. In response, the paper explores the potential of biological control agents, specifically endophytic fungi in advancing sustainable agricultural practices. Through their diverse symbiotic relationships with host plants, these fungi exhibit strong antagonistic capabilities against phytopathogenic fungi by producing various bioactive compounds and promoting plant growth. The review elaborates on the direct and indirect mechanisms of endophytic antagonism, such as antibiosis, mycoparasitism, induction of host resistance, and competition for resources, which collectively contribute to inhibiting pathogenic fungal growth. This paper consolidates the crucial role of endophytic fungi, i.e., Acremonium, Alternaria, Arthrinium, Aspergillus, Botryosphaeria, Chaetomium, Cladosporium, Cevidencealdinia, Epicoccum, Fusarium, Gliocladium, Muscodor, Nigrospora, Paecilomyces, Penicillium, Phomopsis, Pichia, Pochonia, Pythium, Ramichloridium, Rosellinia, Talaromyces, Trichoderma, Verticillium, Wickerhamomyces, and Xylaria, in biological control, supported by the evidence drawn from more than 200 research publications. The paper pays particular attention to Muscodor, Penicillium, and Trichoderma as prominent antagonists. It also emphasizes the need for future genetic-level research to enhance the application of endophytes in biocontrol strategies aiming to highlight the importance of endophytic fungi in facilitating the transition towards more sustainable and environmentally friendly agricultural systems.

6 November 2019 in Pest Management Science
Verified
Journal Article
Closed access
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PRPamoda B Ratnaweera
Pamoda B Ratnaweera
JJJ M Nisansala M Jayasundara
J M Nisansala M Jayasundara
HHH H M Suseema D Herath
H H M Suseema D Herath
DWDavid E Williams
David E Williams
SRSasini U Rajapaksha
Sasini U Rajapaksha
RARaymond J Andersen
Raymond J Andersen

7 July 2018 in Bangladesh Journal of Pharmacology
Verified
Journal Article
Open access
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PRPamoda B Ratnaweera
Pamoda B Ratnaweera
RWR. Chandula Walgama
R. Chandula Walgama
KJKinkini U. Jayasundera
Kinkini U. Jayasundera
SHSuseema D. Herath
Suseema D. Herath
SAS. Abira
S. Abira
ESE. Dilip De Silva
E. Dilip De Silva
In a study designed to determine the antibacterial potential of endophytic fungi inhabiting plants of Cyperaceae family, 72 morphologically distinct endophytic fungi were isolated from six plants and their antibacterial activities against two Gram positive and three Gram negative pathogenic bacterial species were examined. Two antibacterial metabolites from two endophytes were also isolated and their chemical structures and minimum inhibitory concentrations were determined. Sixty six fungal extracts (92%) were active against at least one bacterium tested. Butyrolactone I isolated from the Aspergillus terreus and 9-epi viridol isolated from Trichoderma virens exhibited MIC values in the range 128-256 µg/mL against Gram positive Bacillus subtilits, Staphylococcus aureus, methicillin resistant S. aureus (MRSA) and Escherichia coli. Both compounds were inactive against other micro-organisms tested. This study confirmed that Cyperaceae plants harbor numerous endophytes that produce antibacterial metabolites active against both Gram positive and, to a lesser extent, Gram negative bacteria. Video Clip of Methodology: Column Chromatogrpahy: 15 min 34 sec Click to watch