Amnah Alamri

Dr. Amnah Alamri

orcid

Research Focus & Metrics

Academic Career Length

3Years (2024-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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26 February 2025 in Genes
Verified
Journal Article
Open access
PDF file
SASumayah M. Alharbi
Sumayah M. Alharbi
NANadiah Bakheet Alsulami
Nadiah Bakheet Alsulami
HAHadba Al-Amrah
Hadba Al-Amrah
YAYasir Anwar
Yasir Anwar
OGOla A. Gadah
Ola A. Gadah
ABAhmed Bahieldin
Ahmed Bahieldin
Background/Objectives:Maerua crassifolia, a threatened medicinal species endemic to drylands, exhibits a pronounced drought sensitivity. Despite the critical role of microorganisms, particularly bacteria and fungi, the microbial consortia in M. crassifolia’s rhizosphere remain underexplored. Methods: Metagenomic whole genome shotgun sequencing (WGS) was employed to elucidate the taxonomic composition of bacterial and fungal communities inhabiting the soil rhizosphere of M. crassifolia. Results: The data revealed a marked predominance of bacterial genomes relative to fungal communities, as evidenced by non-redundant gene analysis. Notably, arbuscular mycorrhizal fungi (AMF), specifically Rhizophagus clarus, Rhizophagus irregularis and Funneliformis geosporum, are key rhizosphere colonizers. This study confirmed the presence of phosphate-solubilizing bacteria (PSB), such as Sphingomonas spp., Cyanobacteria and Pseudomonadota, underscoring the critical role of these microorganisms in the phosphorus cycle. Additionally, the study uncovered the presence of previously uncharacterized species within the phylum Actinobacteria, as well as unidentified taxa from the Betaproteobacteria, Gemmatimonadota and Chloroflexota phyla, which may represent novel microbial taxa with potential plant growth-promoting properties. Conclusions: Findings suggest a complex, symbiotic network where AMF facilitate phosphorus uptake through plant–root interactions. In a tripartite symbiosis, PSB enhance inorganic phosphorus solubilization, increasing bioavailability, which AMF assimilate and deliver to plant roots, optimizing nutrition. This bacterial–fungal interplay is essential for plant resilience in arid environments. Future investigations should prioritize the isolation and characterization of underexplored microbial taxa residing in the rhizosphere of M. crassifolia, with particular emphasis on members of the Actinobacteria, Betaproteobacteria, Gemmatimonadota and Chloroflexota phyla to uncover their roles in nutrient acquisition and sustainability.

24 May 2025 in Genetic Resources and Crop Evolution
Verified
Journal Article
Open access
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Mahmoud MagdyMahmoud Magdy
Mahmoud Magdy
KAKhairiah Alwutayd
Khairiah Alwutayd
Hassan MansourHassan Mansour
Hassan Mansour
AAAmnah Alamri
Amnah Alamri
SASalha Mesfer ALshamrani
Salha Mesfer ALshamrani
DMDiaa Abd El Moneim
Diaa Abd El Moneim
Apple mint (Mentha suaveolens Ehrh.) is a plant of the genus Mentha in the family Lamiaceae, commonly known by pineapple mint, woolly mint, and/or round leaf mint. Similar to many aromatic plants, it is valued for its aroma, essential oil content, flavor, and/or other secondary metabolites associated with pharmaceutical properties. M. suaveolens, a sweet-scented aromatic herb, is well-known for flavoring candies, medicines, teas, and toothpaste, as well as being used in many other products. It usually found along streams and humid places in western and southern Europe, as well as the Mediterranean region. In the current study, the chloroplast genome of M. suaveolens was assembled characterized, and compared with other seven Mentha spp. chloroplast genomes, including three natural hybrids. The M. suaveolens circular genome length is 152,053 bp, and there are 134 genes, including 88 protein-coding genes, 37 transfer RNA genes, and 8 ribosomal RNA genes (rRNA), with a total GC content of 37.9%. A chloroplast genome feature comparison between M. suaveolens and six Mentha species was conducted, revealing genomic variability among the studied accessions. Variation among the LSC-IR-SSC boundaries was observed, as well as the RSCU varied according to the region, while the protein-coding regions were more conservative than the intergenic spacers in number of single nucleotide polymorphisms (SNPs). Based on the phyloplastomic, two clades were identified beside M. canadensis. In addition to being informative for any plastomic and/or evolutionary studies of the genus Mentha and family Lamiaceae, the provided information report the maternal source of the Mentha hybrid species.

1 September 2024 in Plants
Verified
Journal Article
Open access
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Hiba ShaghalehHiba Shaghaleh
Hiba Shaghaleh
SRSana Rana
Sana Rana
MRMuhammad Zia Ur Rehman
Muhammad Zia Ur Rehman
Muhammad UsmanMuhammad Usman
Muhammad Usman
MAMujahid Ali
Mujahid Ali
Yousef Alhaj HamoudYousef Alhaj Hamoud
Yousef Alhaj Hamoud
The bioavailability of heavy metals in soil is a crucial factor in determining their potential uptake by plants and their subsequent entry into the food chain. Various methods, including traditional chemical extractants and the diffusive gradients in thin films (DGT) technique, are employed to assess this bioavailability. The bioavailability of heavy metals, particularly cadmium (Cd) and lead (Pb), is also influenced by soil texture and their concentrations in the soil solution. The primary objectives of this experiment were to compare and correlate the assessment of the Cd and Pb bioavailability using the DGT technique and traditional extractants across two soil textural classes: sandy clay loam (SCL) and clay loam (CL) at two contamination levels: aged contaminated (NC) and artificially contaminated (AC). The specific objectives included assessing the bioavailability of Cd and Pb at different growth stages of the wheat plant and correlating the DGT-based bioassessments of Cd and Pb with their concentrations in various plant parts at different growth stages. This study also compared the effectiveness of the DGT method and traditional extraction techniques in assessing the bioavailable fractions of Cd and Pb in soil. The regression analysis demonstrated strong positive correlations between the DGT method and various extraction methods. The results showed that the wheat plants grown in the AC soils exhibited lower root, shoot, and grain weights compared to those grown in the NC soils, indicating that metal contamination negatively impacts plant performance. The concentrations of Cd and Pb in the wheat tissues varied across different growth stages, with the highest levels observed during the grain filling (S3) and maturity (S4) stages. It is concluded that the in situ assessment of Cd and Pb though DGT was strongly and positively correlated with the Cd and Pb concentration in wheat plant parts at the maturity stage. A correlation and regression analysis of the DGT assessment and traditional extractants showed that the DGT method provides a reliable tool for assessing the bioavailability of Cd and Pb in soils and helped in developing sustainable soil management strategies to ensure the safety of agricultural products for human consumption.